Pairwise Alignments

Query, 250 a.a., Branched-chain amino acid ABC transporter, ATP binding protein from Pseudomonas putida KT2440

Subject, 282 a.a., Lipopolysaccharide export system ATP-binding protein LptB from Xanthobacter sp. DMC5

 Score =  166 bits (420), Expect = 5e-46
 Identities = 89/254 (35%), Positives = 152/254 (59%), Gaps = 13/254 (5%)

Query: 5   LLETRHLELAYGPFKAVAGVDLKVRAGTIHTIIGPNGAGKTSLFHCLTGERQATAGKILF 64
           LL+ +++ L +G  KA++ V   VR G + +IIGPNGAGKTS+ +C++G    + G+++F
Sbjct: 17  LLDVQNISLRFGGLKALSDVSFHVRPGELFSIIGPNGAGKTSMLNCISGRYTPSDGRVVF 76

Query: 65  NGQDIIRKPSHGRVALGMARSFQLTSLFQNLSVRENLRLAAQGRDGLGALNFWRSV---- 120
           +G+D+ +   + R  +G+ R+FQ  +LF ++SV +N+ +   GR  L   NF+       
Sbjct: 77  DGRDVTKLKPNRRAEIGIGRTFQNLALFSHMSVLDNIMV---GRHHLLKNNFFTGALYWI 133

Query: 121 ----EHKRSHWNTADQVLERLKLSARAETLAGELSHGQQRVLEVGMSICAKPTLLMLDEP 176
               + +  H    ++V++ L +    +  AG LS+G ++ +E+  ++  +P L++LDEP
Sbjct: 134 GGAQKEELEHRRKVEEVIDFLDIQHVRKATAGTLSYGLRKRVELARAVALEPKLILLDEP 193

Query: 177 TSGMGIDDIPVMTDLISDLGRD--HTVLLIEHNMSIVMSISQRITVMSHGQILVEGTPEQ 234
            +GM +++   M   I DL  +   T+++IEH+M +VM IS R+ V+  G+ LVEG P  
Sbjct: 194 MAGMNLEEKEDMARYIVDLNEEWGMTIIMIEHDMGVVMDISHRVMVLDFGRKLVEGEPAA 253

Query: 235 VRNDERVRTAYLGE 248
           V  D  VR AYLGE
Sbjct: 254 VLADPHVRKAYLGE 267