Pairwise Alignments

Query, 250 a.a., Branched-chain amino acid ABC transporter, ATP binding protein from Pseudomonas putida KT2440

Subject, 253 a.a., Ribose import ATP-binding protein RbsA from Xanthobacter sp. DMC5

 Score =  210 bits (535), Expect = 2e-59
 Identities = 111/246 (45%), Positives = 162/246 (65%), Gaps = 1/246 (0%)

Query: 2   SDYLLETRHLELAYGPFKAVAGVDLKVRAGTIHTIIGPNGAGKTSLFHCLTGERQATAGK 61
           SD +LET+ L  A+  F AV  V+ +VR GTIH +IGPNGAGKT+LF+ LT   Q T+GK
Sbjct: 5   SDIILETKALTKAFSGFVAVNDVNFRVRRGTIHAVIGPNGAGKTTLFNLLTKVHQPTSGK 64

Query: 62  ILFNGQDIIRKPSHGRVALGMARSFQLTSLFQNLSVRENLRLAAQGRDGLGALNFWRSVE 121
           I FNG DI    S     LG+ RSFQ++++F  LSV EN+R+A Q R G  +L+FWRS +
Sbjct: 65  IFFNGADITPLSSPEIARLGLVRSFQVSAIFPALSVMENVRVALQSRRGR-SLDFWRSKK 123

Query: 122 HKRSHWNTADQVLERLKLSARAETLAGELSHGQQRVLEVGMSICAKPTLLMLDEPTSGMG 181
              S  + A++ L ++ L+  A+T+AG+L +GQ+R +E+  ++  +P L++LDEPT+GMG
Sbjct: 124 TLNSLNDEAERYLAQVGLADAADTVAGDLPYGQRRAVEIATTMAMEPDLMLLDEPTAGMG 183

Query: 182 IDDIPVMTDLISDLGRDHTVLLIEHNMSIVMSISQRITVMSHGQILVEGTPEQVRNDERV 241
            +D+    +LI     D T++++EHN+ +V  ++  ITV   GQI+ EG    V ND  V
Sbjct: 184 REDVDRTANLIKQCSGDRTIIMVEHNLGVVSRLADVITVQVRGQIVAEGDYATVSNDPLV 243

Query: 242 RTAYLG 247
           + AYLG
Sbjct: 244 QQAYLG 249