Pairwise Alignments

Query, 250 a.a., Branched-chain amino acid ABC transporter, ATP binding protein from Pseudomonas putida KT2440

Subject, 291 a.a., ABC transporter from Pseudomonas simiae WCS417

 Score =  159 bits (402), Expect = 6e-44
 Identities = 104/281 (37%), Positives = 152/281 (54%), Gaps = 36/281 (12%)

Query: 3   DYLLETRHLELAYGPFKAVAGVDLKVRAGTIHTIIGPNGAGKTSLFHCLTGERQATAGKI 62
           + +L   HL + +G  KA++ V LKV   +I  +IGPNGAGKT++F+CLTG  +A+ GKI
Sbjct: 4   EVVLSVEHLMMHFGGIKALSDVSLKVERNSIFALIGPNGAGKTTVFNCLTGFYKASGGKI 63

Query: 63  -----------------LFNGQDIIRKP-------------SHGRVALGMARSFQLTSLF 92
                             F   D +                +H     G+AR+FQ   LF
Sbjct: 64  ELNIRGKRTNVIQLLGERFQPTDFVSPKRFFSRVFYKMFGGTHWVNRAGLARTFQNIRLF 123

Query: 93  QNLSVRENLRLAAQ---GRDGL-GALNFWRSVEHKRSHWNTADQVLERLKLSARAETLAG 148
           + +SV ENL +A      R+ L G LN     + +    + A   LE + L   A  LAG
Sbjct: 124 KEMSVVENLLVAQHMWVNRNMLAGILNTKGYRKAESDALDHAFYWLEVVDLVDCANRLAG 183

Query: 149 ELSHGQQRVLEVGMSICAKPTLLMLDEPTSGMGIDDIPVMTDLISDLGRDH--TVLLIEH 206
           ELS+GQQR LE+  ++C +P ++ LDEP +G+   +   ++ +I  L  +H  TV+LIEH
Sbjct: 184 ELSYGQQRRLEIARAMCTRPQIICLDEPAAGLNPQETEALSAMIRLLRDEHDLTVVLIEH 243

Query: 207 NMSIVMSISQRITVMSHGQILVEGTPEQVRNDERVRTAYLG 247
           +M +VMSIS  I V+ HG ++ EG P+ +RND +V  AYLG
Sbjct: 244 DMGMVMSISDHIVVLDHGNVIAEGGPDAIRNDPKVIAAYLG 284