Pairwise Alignments

Query, 250 a.a., Branched-chain amino acid ABC transporter, ATP binding protein from Pseudomonas putida KT2440

Subject, 247 a.a., Urea ABC transporter, ATPase protein UrtD from Variovorax sp. SCN45

 Score =  174 bits (441), Expect = 2e-48
 Identities = 97/247 (39%), Positives = 149/247 (60%), Gaps = 5/247 (2%)

Query: 2   SDYLLETRHLELAYGPFKAVAGVDLKVRAGTIHTIIGPNGAGKTSLFHCLTGERQATAGK 61
           +D+ L    L +++  FKA+  + L +    +  IIGPNGAGKT+L   + G+ +A+AG 
Sbjct: 4   TDFALAVEDLTVSFDGFKAIDDLTLYIDRNELRVIIGPNGAGKTTLLDLICGKTRASAGS 63

Query: 62  ILFNGQDIIRKPSHGRVALGMARSFQLTSLFQNLSVRENLRLA-AQGRDGLGALNFWRSV 120
           I F   ++ +   H RV LG+ R FQ  S+++NLSV +NL ++  +GR   GAL F    
Sbjct: 64  IKFKNTELTKMAEHKRVRLGIGRKFQTPSIYENLSVFQNLEVSFPKGRSVFGALAFKCDE 123

Query: 121 EHKRSHWNTADQVLERLKLSARAETLAGELSHGQQRVLEVGMSICAKPTLLMLDEPTSGM 180
           E K      AD++     L+ + ET AG LSHGQ++ LE+GM +  +P LLMLDEP +GM
Sbjct: 124 EVKARVQAVADEI----GLADKLETEAGLLSHGQKQWLEIGMLLMQEPELLMLDEPIAGM 179

Query: 181 GIDDIPVMTDLISDLGRDHTVLLIEHNMSIVMSISQRITVMSHGQILVEGTPEQVRNDER 240
              +  +  DL+  + ++  V++IEH+M+ V  I+ ++TVM  G+IL EG  E+V+ D +
Sbjct: 180 SARERELTADLLKRICQNRAVIVIEHDMAFVKQIAHKVTVMHQGKILAEGPMEKVQADPK 239

Query: 241 VRTAYLG 247
           V   YLG
Sbjct: 240 VIDVYLG 246