Pairwise Alignments

Query, 250 a.a., Branched-chain amino acid ABC transporter, ATP binding protein from Pseudomonas putida KT2440

Subject, 255 a.a., ABC transporter, ATP-binding protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

 Score =  178 bits (451), Expect = 1e-49
 Identities = 99/250 (39%), Positives = 145/250 (58%), Gaps = 5/250 (2%)

Query: 5   LLETRHLELAYGPFKAVAGVDLKVRAGTIHTIIGPNGAGKTSLFHCLTGERQATAGKILF 64
           +LETR L + +G   AV  V      GT+  I+GPNGAGKT+ F+ ++G+ +A+AG +  
Sbjct: 1   MLETRDLTIRFGGHVAVNSVSCAFAPGTLTAIVGPNGAGKTTYFNLISGQLKASAGTVSL 60

Query: 65  NGQDIIRKPSHGRVALGMARSFQLTSLFQNLSVRENLRLAAQG-RDGL--GALNFWRSVE 121
           +GQ +       R   G+ R+FQLT+LF NL+V EN+RLA Q  R+G     LN W    
Sbjct: 61  DGQPLSGLSPSARTHAGLGRAFQLTNLFPNLTVLENVRLAVQATREGAHRRGLNLWSIWS 120

Query: 122 HKRSHWNTADQVLERLKLSARAETLAGELSHGQQRVLEVGMSICAKPTLLMLDEPTSGMG 181
             ++    ADQ+L  + L +R       L HG QR LEV + +  +P + M DEPT+GM 
Sbjct: 121 DHKALTERADQILAEVALKSREHATVASLPHGDQRKLEVALLMALEPKVFMFDEPTAGMN 180

Query: 182 IDDIPVMTDLISDLGRD--HTVLLIEHNMSIVMSISQRITVMSHGQILVEGTPEQVRNDE 239
             + PV+ DLI  L +D   T+LL+EH M +V  ++ RI V+ +G ++ +G P +V    
Sbjct: 181 AAEAPVILDLIRKLKQDKTKTILLVEHKMDVVRELADRIIVLHNGTLVADGEPAEVIASP 240

Query: 240 RVRTAYLGEA 249
            V+ AYLG A
Sbjct: 241 VVQEAYLGVA 250