Pairwise Alignments

Query, 250 a.a., Branched-chain amino acid ABC transporter, ATP binding protein from Pseudomonas putida KT2440

Subject, 256 a.a., Broad-specificity amino acid ABC transporter, ATP-binding protein 1 from Variovorax sp. SCN45

 Score =  186 bits (471), Expect = 5e-52
 Identities = 100/247 (40%), Positives = 154/247 (62%), Gaps = 1/247 (0%)

Query: 1   MSDYLLETRHLELAYGPFKAVAGVDLKVRAGTIHTIIGPNGAGKTSLFHCLTGERQATAG 60
           MSD +LETR L   +  F AV+ V+L V  G+IH +IGPNGAGKT+ F+ LT   + T G
Sbjct: 1   MSDVILETRQLTKEFKGFTAVSKVNLSVVRGSIHALIGPNGAGKTTCFNLLTKFLEPTTG 60

Query: 61  KILFNGQDIIRKPSHGRVALGMARSFQLTSLFQNLSVRENLRLAAQGRDGLGALNFWRSV 120
            ILFNGQDI R+        G+ RSFQ++++F +L++ EN+RL  Q R G  + +FW+S 
Sbjct: 61  TILFNGQDITRERPAQIARRGIIRSFQISAVFPHLTLLENVRLGLQRRLGT-SYHFWKSE 119

Query: 121 EHKRSHWNTADQVLERLKLSARAETLAGELSHGQQRVLEVGMSICAKPTLLMLDEPTSGM 180
           +  +     A ++L  + L   A+     L +G++R LE+  ++  +P L++LDEPT GM
Sbjct: 120 KSLKPLDARARELLAEVGLDELADEQTVNLPYGRKRALEIATTLAMEPELMLLDEPTQGM 179

Query: 181 GIDDIPVMTDLISDLGRDHTVLLIEHNMSIVMSISQRITVMSHGQILVEGTPEQVRNDER 240
           G +D+  + +LI  +    T+L++EHNMS+V +I+  ITV+  G +L EG   +V  + +
Sbjct: 180 GHEDVHRVAELIKRVSAGRTILMVEHNMSVVSTIADTITVLQRGAVLAEGPYAEVSKNPQ 239

Query: 241 VRTAYLG 247
           V  AY+G
Sbjct: 240 VMEAYMG 246