Pairwise Alignments

Query, 250 a.a., Branched-chain amino acid ABC transporter, ATP binding protein from Pseudomonas putida KT2440

Subject, 266 a.a., Urea ABC transporter, ATPase protein UrtD from Variovorax sp. SCN45

 Score =  160 bits (405), Expect = 2e-44
 Identities = 90/247 (36%), Positives = 144/247 (58%), Gaps = 5/247 (2%)

Query: 2   SDYLLETRHLELAYGPFKAVAGVDLKVRAGTIHTIIGPNGAGKTSLFHCLTGERQATAGK 61
           ++ +L    L +++  FKAV G+ L V    +  IIGPNGAGKT+L   + G+ + ++G+
Sbjct: 23  NEQILRVEDLTVSFDGFKAVDGLSLAVERNELRVIIGPNGAGKTTLLDMVCGKTKPSSGR 82

Query: 62  ILFNGQDIIRKPSHGRVALGMARSFQLTSLFQNLSVRENLRLAAQGRDGL-GALNFWRSV 120
           +LFNG D+ R   H  V  G+ R FQ  S++++L+V EN  ++     GL  +L F R+ 
Sbjct: 83  VLFNGTDLARMNEHEIVRAGVGRKFQTPSVYEDLTVLENFEISLPRMHGLLQSLAFRRTA 142

Query: 121 EHKRSHWNTADQVLERLKLSARAETLAGELSHGQQRVLEVGMSICAKPTLLMLDEPTSGM 180
             +       D +   + L  + +  AG+LSHGQ++ LE+GM +  +P LL+LDEP +GM
Sbjct: 143 ALRER----IDAMAADVFLLDQLDRRAGQLSHGQKQWLEIGMLLMQEPELLLLDEPVAGM 198

Query: 181 GIDDIPVMTDLISDLGRDHTVLLIEHNMSIVMSISQRITVMSHGQILVEGTPEQVRNDER 240
              +     DL+  +    +V++IEH+M  V  I+ R+TV+  G++L EGT  +V+ D R
Sbjct: 199 SPREREQTGDLLRRISPGKSVVVIEHDMDFVKRIAHRVTVLHQGRLLSEGTAAEVQADPR 258

Query: 241 VRTAYLG 247
           V   YLG
Sbjct: 259 VIDVYLG 265