Pairwise Alignments

Query, 250 a.a., Branched-chain amino acid ABC transporter, ATP binding protein from Pseudomonas putida KT2440

Subject, 253 a.a., ABC transporter, ATP-binding protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

 Score =  177 bits (448), Expect = 2e-49
 Identities = 93/247 (37%), Positives = 147/247 (59%), Gaps = 1/247 (0%)

Query: 1   MSDYLLETRHLELAYGPFKAVAGVDLKVRAGTIHTIIGPNGAGKTSLFHCLTGERQATAG 60
           MSD +L T  L + +G   A   V ++++ G  H +IGPNGAGKT+L + LTG    T G
Sbjct: 1   MSDTVLSTHGLVMRFGGITATNNVTMELKRGARHALIGPNGAGKTTLINQLTGVLTPTEG 60

Query: 61  KILFNGQDIIRKPSHGRVALGMARSFQLTSLFQNLSVRENLRLAAQGRDGLGALNFWRSV 120
           +I   G+DI +   H RVA G+ R+FQ+  LF +++  E L L      G GA  +WR +
Sbjct: 61  RITLLGEDITKLAPHKRVARGLVRTFQINQLFDSMTPLETLALVVSQHQGAGA-QWWRPL 119

Query: 121 EHKRSHWNTADQVLERLKLSARAETLAGELSHGQQRVLEVGMSICAKPTLLMLDEPTSGM 180
              ++    A Q+LE+  LS  A      L++G++R+LE+ +++  +P +L+LDEP +G+
Sbjct: 120 GASKAITERAAQLLEQFHLSDVARQQVKHLAYGKRRLLEIAIALACEPRVLLLDEPVAGV 179

Query: 181 GIDDIPVMTDLISDLGRDHTVLLIEHNMSIVMSISQRITVMSHGQILVEGTPEQVRNDER 240
              +   +   ++ L  D +VLLIEH+M +V S + R+TV+ +G +L EG PE + ND +
Sbjct: 180 PAGEREELLQTVAALPADVSVLLIEHDMDLVFSFADRMTVLVNGTLLTEGDPETIANDPK 239

Query: 241 VRTAYLG 247
           V+  YLG
Sbjct: 240 VKEVYLG 246