Pairwise Alignments

Query, 250 a.a., Branched-chain amino acid ABC transporter, ATP binding protein from Pseudomonas putida KT2440

Subject, 291 a.a., High-affinity branched-chain amino acid transport ATP-binding protein BraF from Pseudomonas putida KT2440

 Score =  155 bits (391), Expect = 1e-42
 Identities = 102/281 (36%), Positives = 151/281 (53%), Gaps = 36/281 (12%)

Query: 3   DYLLETRHLELAYGPFKAVAGVDLKVRAGTIHTIIGPNGAGKTSLFHCLTGERQATAGKI 62
           D +L   +L + +G  KA++ V LKVR   I  +IGPNGAGKT++F+CLTG  +A+ G+I
Sbjct: 4   DIILSVDNLMMQFGGIKALSDVSLKVRRNQIFALIGPNGAGKTTVFNCLTGFYKASGGRI 63

Query: 63  -----------------LFNGQDIIRKP-------------SHGRVALGMARSFQLTSLF 92
                             F   D +                +H     G+AR+FQ   LF
Sbjct: 64  ELNVRGSHTNVIQLLGERFQAADFVSPARFANRMYYKMFGGTHLVNRAGLARTFQNIRLF 123

Query: 93  QNLSVRENLRLAAQ---GRDGL-GALNFWRSVEHKRSHWNTADQVLERLKLSARAETLAG 148
           + +SV ENL +A      R+ L G LN     + +    + A   LE + L   A  LAG
Sbjct: 124 KEMSVVENLLVAQHMWVNRNLLAGVLNTKAYRKAESDALDHAFYWLEVVDLVDCANRLAG 183

Query: 149 ELSHGQQRVLEVGMSICAKPTLLMLDEPTSGMGIDDIPVMTDLISDLGRDH--TVLLIEH 206
           ELS+GQQR LE+  ++C +P ++ LDEP +G+   +   ++ +I  L  +H  TV+LIEH
Sbjct: 184 ELSYGQQRRLEIARAMCTRPKIICLDEPAAGLNPQETEALSRMIRVLRDEHDITVVLIEH 243

Query: 207 NMSIVMSISQRITVMSHGQILVEGTPEQVRNDERVRTAYLG 247
           +M +VMSIS  I V+ HG ++ EG P+ +R++  V  AYLG
Sbjct: 244 DMGMVMSISDHIVVLDHGNVIAEGAPQDIRHNPTVIAAYLG 284