Pairwise Alignments

Query, 250 a.a., Branched-chain amino acid ABC transporter, ATP binding protein from Pseudomonas putida KT2440

Subject, 255 a.a., branched chain amino acid transporter - ATP binding subunit from Pseudomonas putida KT2440

 Score =  162 bits (410), Expect = 6e-45
 Identities = 98/255 (38%), Positives = 145/255 (56%), Gaps = 6/255 (2%)

Query: 1   MSDYLLETRHLELAYGPFKAVAGVDLKVRAGTIHTIIGPNGAGKTSLFHCLTGERQATAG 60
           MS  +L+   L + +G   AV GV L V+   +  +IGPNGAGKT++F+CLTG  + + G
Sbjct: 1   MSREILQVSGLSMRFGGLLAVNGVALTVKEKQVVALIGPNGAGKTTVFNCLTGFYKPSGG 60

Query: 61  KILFNGQDIIRKPSHGRVALGMARSFQLTSLFQNLSVRENLRLAAQGRDGLGAL-NFWRS 119
            IL +GQ I     H     G+ R+FQ   LF+ ++  ENL +A             +++
Sbjct: 61  TILLDGQPIQGLAGHQIARKGVVRTFQNVRLFKEMTALENLLIAQHRHLNTNFFAGLFKT 120

Query: 120 VEHKRSHWNTADQV---LERLKLSARAETLAGELSHGQQRVLEVGMSICAKPTLLMLDEP 176
              +RS     ++    LE++ L+  A   AG L++GQQR LE+   +  +P ++MLDEP
Sbjct: 121 PSFRRSEKEAMERAQYWLEKVNLTEFANRTAGTLAYGQQRRLEIARCMMTQPRIIMLDEP 180

Query: 177 TSGMGIDDIPVMTDLISDLGRDH--TVLLIEHNMSIVMSISQRITVMSHGQILVEGTPEQ 234
            +G+   +   +  LI+ L   H  TVLLIEH+M +VMSIS  I V++ G  L  GTPEQ
Sbjct: 181 AAGLNPKETEDLKALIAYLRESHNVTVLLIEHDMKLVMSISDHIVVINQGTPLAHGTPEQ 240

Query: 235 VRNDERVRTAYLGEA 249
           +R++  V  AYLGEA
Sbjct: 241 IRDNPDVIKAYLGEA 255