Pairwise Alignments

Query, 250 a.a., Branched-chain amino acid ABC transporter, ATP binding protein from Pseudomonas putida KT2440

Subject, 255 a.a., high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG from Escherichia coli ECRC62

 Score =  164 bits (414), Expect = 2e-45
 Identities = 99/255 (38%), Positives = 146/255 (57%), Gaps = 6/255 (2%)

Query: 1   MSDYLLETRHLELAYGPFKAVAGVDLKVRAGTIHTIIGPNGAGKTSLFHCLTGERQATAG 60
           MS  LL    L + +G   AV  V+L++    I ++IGPNGAGKT++F+CLTG  + T G
Sbjct: 1   MSQPLLSVNGLMMRFGGLLAVNNVNLELYPQEIVSLIGPNGAGKTTVFNCLTGFYKPTGG 60

Query: 61  KILFNGQDIIRKPSHGRVALGMARSFQLTSLFQNLSVRENLRLAAQGRDGLGALN-FWRS 119
            IL   Q +   P      +G+ R+FQ   LF+ ++V ENL +A   +   G  +   ++
Sbjct: 61  TILLRDQHLEGLPGQQIARMGVVRTFQHVRLFREMTVIENLLVAQHQQLKTGLFSGLLKT 120

Query: 120 VEHKRSHWNTADQV---LERLKLSARAETLAGELSHGQQRVLEVGMSICAKPTLLMLDEP 176
              +R+     D+    LER+ L   A   A  L++G QR LE+   +  +P +LMLDEP
Sbjct: 121 PSFRRAQSEALDRAATWLERIGLLEHANRQASNLAYGDQRRLEIARCMVTQPEILMLDEP 180

Query: 177 TSGMGIDDIPVMTDLISDLGRDH--TVLLIEHNMSIVMSISQRITVMSHGQILVEGTPEQ 234
            +G+   +   + +LI++L   H  T+LLIEH+M +VM IS RI V++ G  L  GTPEQ
Sbjct: 181 AAGLNPKETKELDELIAELRNHHNTTILLIEHDMKLVMGISDRIYVVNQGTPLANGTPEQ 240

Query: 235 VRNDERVRTAYLGEA 249
           +RN+  V  AYLGEA
Sbjct: 241 IRNNPDVIRAYLGEA 255