Pairwise Alignments

Query, 250 a.a., Branched-chain amino acid ABC transporter, ATP binding protein from Pseudomonas putida KT2440

Subject, 249 a.a., ABC transporter nucleotide binding/ATPase from Agrobacterium fabrum C58

 Score =  163 bits (412), Expect = 4e-45
 Identities = 93/248 (37%), Positives = 141/248 (56%), Gaps = 5/248 (2%)

Query: 1   MSDYLLETRHLELAYGPFKAVAGVDLKVRAGTIHTIIGPNGAGKTSLFHCLTGERQATAG 60
           MS   L    L + +G FKAV+ V + VR G +  ++G NGAGKT+L   ++G+ ++T G
Sbjct: 1   MSAIALTVDGLSVEFGGFKAVSNVSITVRDGELRVLLGANGAGKTTLMDLISGKTRSTQG 60

Query: 61  KILFNGQDIIRKPSHGRVALGMARSFQLTSLFQNLSVRENLRLAAQGRDGLGA-LNFWRS 119
           K+     DI   P H     G+ R FQ+ S+F++L+VR+NL +A      + A L F  S
Sbjct: 61  KVFVYDTDITNWPEHNIARAGIGRKFQIPSIFRDLTVRQNLEVANCRNPSVFANLRFGFS 120

Query: 120 VEHKRSHWNTADQVLERLKLSARAETLAGELSHGQQRVLEVGMSICAKPTLLMLDEPTSG 179
                   N  D+VL    L A  +  A  LSHGQ + LE+GM I   P +++LDEPT+G
Sbjct: 121 PAEA----NRVDEVLALTGLEAEKDVTAAYLSHGQTQWLELGMLIVQDPKVILLDEPTAG 176

Query: 180 MGIDDIPVMTDLISDLGRDHTVLLIEHNMSIVMSISQRITVMSHGQILVEGTPEQVRNDE 239
           M   +      +I +L   HT+L++EH+M  V  I++ ITV+  G++L EG+   + ++ 
Sbjct: 177 MTQAETRKTAQIIKNLKGRHTILVVEHDMGFVREIAEYITVLHLGEVLAEGSVGDIEHNP 236

Query: 240 RVRTAYLG 247
           +VR AYLG
Sbjct: 237 KVREAYLG 244