Pairwise Alignments

Query, 231 a.a., Branched-chain amino acid ABC transporter, ATP-binding protein from Pseudomonas putida KT2440

Subject, 236 a.a., High-affinity branched-chain amino acid transport ATP-binding protein LivF from Xanthobacter sp. DMC5

 Score =  187 bits (475), Expect = 2e-52
 Identities = 102/234 (43%), Positives = 146/234 (62%), Gaps = 5/234 (2%)

Query: 1   MLNVDSIHSYYDKSHVLEGVSLKVEAGELVTLLGRNGAGKTTTLRSILGIVRPRQGQISF 60
           +L+V+ I S Y    VL  VS++V  GE V +LG NGAGK+T LR+I G++ P  G ISF
Sbjct: 3   LLSVEGIRSGYGSLQVLSEVSIEVAEGEAVAILGPNGAGKSTLLRTISGLITPTAGAISF 62

Query: 61  NGQQLVGREIFDIARLGIALVPEHRGIFRQLSVEENLKIA-----VRKTSRWQLEDVYSM 115
           +G  L+      I   G+  VPE R IF  LSV ENL +       R      L+D++ +
Sbjct: 63  DGHDLLAMPAHRIPHAGLVQVPEARHIFPSLSVRENLLVGGTPLPTRGAREAALDDIWRI 122

Query: 116 FPRLKERRRNGGFALSGGEQQMLAIARALLNGPRLLILDEPTEGLAPVIVDELVKILRRI 175
           FP L  +R      LSGG+QQM+AI RAL++ PRL++LDEP+ GLAP++V EL ++LR +
Sbjct: 123 FPMLVTKRDAPAGTLSGGQQQMVAIGRALMSRPRLVMLDEPSLGLAPLVVRELYEVLRSL 182

Query: 176 KDEGLSILLVEQNLMVCDALADRHYVLEQGRVAYQGSAAQFREDPSIKNRYLAL 229
              GL++LLVEQ++ V  +L  R YV+E G +A  G+A++ RE   ++  YL +
Sbjct: 183 VQSGLTLLLVEQDVPVALSLVSRAYVVENGSIALSGTASELRESDHVRQAYLGI 236