Pairwise Alignments

Query, 231 a.a., Branched-chain amino acid ABC transporter, ATP-binding protein from Pseudomonas putida KT2440

Subject, 240 a.a., ABC transporter, ATP-binding protein 2 (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

 Score =  199 bits (507), Expect = 3e-56
 Identities = 103/236 (43%), Positives = 154/236 (65%), Gaps = 9/236 (3%)

Query: 1   MLNVDSIHSYYDKSHVLEGVSLKVEAGELVTLLGRNGAGKTTTLRSILGIVRPRQGQISF 60
           ML + ++ + Y K  VL G+S++V  G++VTL+G NGAGKTTT+R++ G++ P  G+I+ 
Sbjct: 1   MLTIQNLFAGYGKVQVLHGISIEVPKGKVVTLIGSNGAGKTTTMRAVSGMIAPTAGEITL 60

Query: 61  NGQQLVGREIFDIARLGIALVPEHRGIFRQLSVEENLKIAV---------RKTSRWQLED 111
           NG+++ G E + IA+ G+A  PE R +F  ++V +NL +           R      LE 
Sbjct: 61  NGKRIDGLESYHIAKQGLAHSPEGRRVFATMTVTDNLTLGAFPRLTGSRPRGDVAGDLER 120

Query: 112 VYSMFPRLKERRRNGGFALSGGEQQMLAIARALLNGPRLLILDEPTEGLAPVIVDELVKI 171
              +FPRLKERR      LSGGEQQMLA+ARA++  P +++LDEP+ GLAP++V E+ +I
Sbjct: 121 ALELFPRLKERRTQLAGTLSGGEQQMLAMARAVMLNPEVVLLDEPSMGLAPILVAEVFRI 180

Query: 172 LRRIKDEGLSILLVEQNLMVCDALADRHYVLEQGRVAYQGSAAQFREDPSIKNRYL 227
           + R+K EG+++LLVEQ       +AD  YVLE GR++  G A + R DP++K  YL
Sbjct: 181 IERLKSEGVTMLLVEQFAAAALGVADYGYVLENGRISLHGPAEKLRSDPAVKAAYL 236