Pairwise Alignments

Query, 231 a.a., Branched-chain amino acid ABC transporter, ATP-binding protein from Pseudomonas putida KT2440

Subject, 243 a.a., Branched-chain amino acid ABC transporter, ATP-binding protein LivF (TC 3.A.1.4.1) from Variovorax sp. SCN45

 Score =  189 bits (480), Expect = 4e-53
 Identities = 100/233 (42%), Positives = 154/233 (66%), Gaps = 7/233 (3%)

Query: 1   MLNVDSIHSYYDKSHVLEGVSLKVEAGELVTLLGRNGAGKTTTLRSILGIVRPRQGQISF 60
           ML +  +H  Y +   + GVSL ++ G++++++G NGAGKTT L + +G++ P +G + F
Sbjct: 4   MLEIGDLHVSYGQVEAVRGVSLDLQPGQIISVIGPNGAGKTTLLAAAMGLL-PCKGTLRF 62

Query: 61  NGQQLVGREIFDIARLGIALVPEHRGIFRQLSVEENLKI-AVRKTSRW-----QLEDVYS 114
            G+ L G ++      G+ LVPE R +F +L+V +NL++ A  K  R      +L+ VY 
Sbjct: 63  EGEDLQGLDVEARVERGLCLVPEKRELFGELTVLDNLQLGAYAKRLRGDAMKKRLQSVYD 122

Query: 115 MFPRLKERRRNGGFALSGGEQQMLAIARALLNGPRLLILDEPTEGLAPVIVDELVKILRR 174
            FPRL ERR      LSGGE+QMLA+ RAL++ PRLL+LDEP+ GLAP+IV +++ I+R+
Sbjct: 123 RFPRLAERRTQRADTLSGGERQMLAVGRALMSAPRLLMLDEPSLGLAPLIVRDILTIVRK 182

Query: 175 IKDEGLSILLVEQNLMVCDALADRHYVLEQGRVAYQGSAAQFREDPSIKNRYL 227
           ++D+G+SILLVEQN       +D+ YVLE G +A  G++A+   DP ++  YL
Sbjct: 183 LRDDGVSILLVEQNARAALESSDQGYVLETGEIALSGASAELASDPRVQATYL 235