Pairwise Alignments

Query, 512 a.a., lipid II flippase from Pseudomonas putida KT2440

Subject, 536 a.a., murein biosynthesis integral membrane protein MurJ from Rhodanobacter sp000427505 FW510-R12

 Score =  427 bits (1099), Expect = e-124
 Identities = 227/527 (43%), Positives = 327/527 (62%), Gaps = 24/527 (4%)

Query: 2   NLLKSLAAVSSITMISRVLGFVRDTILARIFGAGVATDAFFIAFKLPNLLRRIFAEGAFS 61
           ++L+ L + SS+TM+SRVLG VRD  +   FGA  ATDAF++AF++PN +RR+FAEG+FS
Sbjct: 5   SMLRGLLSFSSMTMVSRVLGLVRDMSINAAFGANGATDAFWVAFRIPNFMRRLFAEGSFS 64

Query: 62  QAFVPILAEYKTQQGEEATRTFIAYVSGLLTLVLALVTAIGILAAPWVVWATAPGFVDST 121
            AFVP+  E K        +  +A VSG L  VL L+TA+GI+ AP V    +PG +D  
Sbjct: 65  TAFVPVFTEVKETGTHAQLKELMARVSGTLGGVLLLITALGIIFAPQVTVLFSPGAIDEP 124

Query: 122 EKYALTTDLLRVTFPYIFLISLSSLAGAILNTWNRFSVPAFTPTLLNVAMIAFAVLLTPY 181
            K+ LT +LLR+TFP++  +SL++L G  LN+++RF++PA TP +LN+ MIA A+ L+  
Sbjct: 125 VKFGLTVELLRLTFPFLLFVSLTALCGGALNSFHRFALPALTPVILNLCMIAGALWLSKR 184

Query: 182 FNPPIMALAWGVLAGGLAQLLYQLPALKKIGMLVLPRLNLKDAGVWRVLKQMLPAILGVS 241
              PI+A+ W +LA G+ QLL+QLPAL+ + +L LPR       V ++++ M+P + G S
Sbjct: 185 LQTPILAMGWAILAAGILQLLFQLPALRGLDLLTLPRWGWSHPQVRKIMRLMVPTLFGSS 244

Query: 242 VSQISLIINTIFASFLVAGSVSWMYYADRLMELPSGVLGVALGTILLPTLAKTYANKDRE 301
           V+QI+L+ +T+ AS LV GS SW+  ADR +ELP GV GVALGT++LP+L++ +   D  
Sbjct: 245 VAQINLLFDTVIASLLVVGSQSWLSQADRFLELPLGVFGVALGTVILPSLSRHHVTTDTA 304

Query: 302 EYSRILDWGLRLCFLLVLPCTLALAILAEPLTVALFQYGKFSAFDAAMTQRALIAYSVGL 361
            +S  LDWGLR+  L+ +P   AL +LA PL   LFQ+G +SA D  M   ++ A S GL
Sbjct: 305 GFSHALDWGLRVTLLIAVPAMFALMLLAGPLVATLFQHGHWSAHDTHMATLSITALSFGL 364

Query: 362 LAIILIKVLAPGFYAQQNIRTPVKIAVFTLVCTQLFNLALVG------------------ 403
            A  L+KVL P FYA+Q+ RTPV+ AV +L+   L N+  +                   
Sbjct: 365 PAFALVKVLLPAFYARQDTRTPVRAAVASLLANMLLNVVFLALLFELWAPAELKRLPWMD 424

Query: 404 -----PLAHAGLALAISLGACLNAGLLFWKLRSQQLFEPQPGWAVFLLKLVLAVTLMSAV 458
                P  H  L +A ++ A +N  LL+  L+   +++ QPGW   LL+L  A   M A+
Sbjct: 425 GLARLPGLHMALGMASAVAAYVNLWLLWHWLKQAGVYQRQPGWPRHLLRLAAACAAMVAL 484

Query: 459 LLAGMHYMPAWEQGI-MLERFLRLGALILAGVVTYFGCLYLCGFRPR 504
           LLAG+ + P W  G+ +L R   L AL+LAG   Y   L+  GFR R
Sbjct: 485 LLAGLWWWPNWTHGVPVLTRLWHLAALVLAGGAGYVAVLFAGGFRLR 531