Pairwise Alignments

Query, 512 a.a., lipid II flippase from Pseudomonas putida KT2440

Subject, 469 a.a., membrane protein from Pseudomonas simiae WCS417

 Score =  120 bits (300), Expect = 1e-31
 Identities = 142/497 (28%), Positives = 218/497 (43%), Gaps = 44/497 (8%)

Query: 3   LLKSLAAVSSITMISRVLGFVRDTILARIFGAGVATDAFFIAFKLPNLLRRIFAEGAFSQ 62
           +L S A ++  T++   LGF R+ +L   +GAG  +DAF IA  LP  LR   A G  S 
Sbjct: 1   MLGSAAWLTLATLLGLCLGFAREWLLVAAWGAGERSDAFLIALFLPEALRMSLAGGVLSA 60

Query: 63  AFVPILAEYKTQQGEEATRTFIAYVSGLLTLVLALVTAIGI-LAAPWVVWATAPGFVDST 121
           A +P+   Y  ++ +E      A    L  L++ALVT++ + L APW+V    PG   S 
Sbjct: 61  AALPL---YLARKDDERLGWLAALFPAL--LLIALVTSLLLTLLAPWLVQLLGPGLAASA 115

Query: 122 EKYALTTDLLRVTFPYIFLISLSSLAGAILNTWNRFSVPAFTPTLLNVAMIAFAVLLTPY 181
              AL +  L++    +  + L +L    L    RF +      L N+  + +  L    
Sbjct: 116 T--ALASSNLQIVAWCVPGLMLHALFSIPLQASERFVLAGLGSLLFNLPPVTYLALAGTA 173

Query: 182 FNPPIMALAWGVLAGGLAQLLYQLPALKKIG----MLVLPRLNLKDAGVWRVLKQMLPAI 237
             P  +ALA   LAG L   L  LP++ + G       LP   L++ G     +++ P +
Sbjct: 174 TQPHALALA--CLAGSLLMPLALLPSMWRQGWRPWCWQLPWAPLRELG-----QRIGPLL 226

Query: 238 LGVSVSQISLIINTIFASFLVAGSVSWMYYADRLMELPSGVLGVALGTILLPTLAKTYAN 297
           L    SQ   +I  + AS L  G+V+W+  A +LM LP   L ++L  +LL  +++    
Sbjct: 227 LSNGASQGLALIERLVASLLGEGAVTWVNLARKLMNLPLIAL-MSLNQVLLGMMSR---- 281

Query: 298 KDREEYSRILDWGLRLCFLLVLPCTLALAILAEPLTVALFQYGKFSAFDAAMTQRALIAY 357
           +  +E   +L  GL    +L LP  + L + A P  VAL    +  + D+ +    L  +
Sbjct: 282 RQGDERLALLKRGLETASVLTLPAGVGL-VAAAPSLVALLLPAQ--SLDSPL-PLLLAWF 337

Query: 358 SVGLLAIILIKVLAPGFYAQQNIRTPVKIAVFTLVCTQLFNLALVGPLAHAGLALAISLG 417
           +V L+      +LA   YA  + R P++  +   +   L    L      AG+ LA   G
Sbjct: 338 AVPLVFGAWNALLARYAYAAGDTRQPLRCELLGSLVNALLLGVLPFVFGLAGIPLAALAG 397

Query: 418 ACLNAGLLFWKLRSQQLFEPQPGWAVFLLKLVLAVTLMSAVLLAGMHYMPAWEQGIMLER 477
               A LL   ++ Q L    P    +LL  V    LM    LA       W        
Sbjct: 398 VICTALLL---MQRQALLSALPWARSWLLNAV----LMGVAALALFRIEGVW-------- 442

Query: 478 FLRLGALILAGVVTYFG 494
            L+LG   LAG V   G
Sbjct: 443 -LQLGLSTLAGAVVLLG 458