Pairwise Alignments

Query, 512 a.a., lipid II flippase from Pseudomonas putida KT2440

Subject, 555 a.a., Peptidoglycan lipid II flippase MurJ from Variovorax sp. SCN45

 Score =  439 bits (1128), Expect = e-127
 Identities = 249/525 (47%), Positives = 330/525 (62%), Gaps = 24/525 (4%)

Query: 1   MNLLKSLAAVSSITMISRVLGFVRDTILARIFGAGVATDAFFIAFKLPNLLRRIFAEGAF 60
           ++LLKS + VS +T+ SR+ G VRD + A +FG    TDAF +AF++PNL RR+F EGAF
Sbjct: 39  VSLLKSASTVSLLTLASRITGLVRDVLFASVFGVSALTDAFNVAFRIPNLFRRVFGEGAF 98

Query: 61  SQAFVPILAEYKTQQGEEATRTFIAYVSGLLTLVLALVTAIGILAAPWVVWATAPGFVDS 120
           SQAFVP+LA  KT+ GEE  R  I +V+ LLT  L +V  IG++AAP +VWA A G    
Sbjct: 99  SQAFVPVLAGRKTEAGEEGARQLIDHVATLLTWTLVVVCVIGVVAAPLMVWAMASGLAGF 158

Query: 121 TEKYALTTDLLRVTFPYIFLISLSSLAGAILNTWNRFSVPAFTPTLLNVAMIAFAVLLTP 180
                +T    R  FPYI  +SL +LAG ILNTW +F+VPA +P LLN+A+I    +  P
Sbjct: 159 DSAVVMT----RWMFPYIGFMSLVALAGGILNTWRKFAVPAASPVLLNIALILSISVGAP 214

Query: 181 YFN----PPIMALAWGVLAGGLAQLLYQLPALKKIGMLVLPRLNLK---------DAGVW 227
            F      PI A   GVL GG+ QL  Q+PAL+ +G++  PR+            D    
Sbjct: 215 LFRRYGIEPIYAQCVGVLVGGMLQLALQIPALRSLGLM--PRVGASFRALRAAWTDPTTR 272

Query: 228 RVLKQMLPAILGVSVSQISLIINTIFASFLVAGSVSWMYYADRLMELPSGVLGVALGTIL 287
           +V+K MLPA+LGVSV+QISL+INT  AS L AGSV+W+  ADRLME P+ +LGVALG +L
Sbjct: 273 KVMKLMLPALLGVSVAQISLLINTQIASHLAAGSVTWVVNADRLMEFPTAMLGVALGVVL 332

Query: 288 LPTLAKTYANKDREEYSRILDWGLRLCFLLVLPCTLALAILAEPLTVALFQYGKFSAFDA 347
           +P LA   A KD   YS +LDWGLRL  LL  PC +AL + A+PL   LF  G ++  D 
Sbjct: 333 MPQLAGARAAKDDARYSSLLDWGLRLVVLLSAPCAVALLLFAQPLVAVLFHNGAYAGDDV 392

Query: 348 AMTQRALIAYSVGLLAIILIKVLAPGFYAQQNIRTPVKIAVFTLVCTQLFNLALVGPLAH 407
             T  AL  Y VGL+ I+ +KVLAPG+YA+Q+ RTP+ IAV  LV TQ+ N  LV  L H
Sbjct: 393 RRTALALTGYGVGLIGIVAVKVLAPGYYAKQDTRTPMLIAVGVLVFTQVLNFFLVPVLQH 452

Query: 408 AGLALAISLGACLNAGLLFWKLRSQQLFEPQPGWAVFLLKLVLAVTLMSAVLLAGMHYMP 467
           A L L I++GA +NA  L   L  +  ++P+PGW  F L+++    +++A+L+ G  +  
Sbjct: 453 AALTLTIAIGALVNATWLLVGLIRRGSYKPEPGWGKFALQVLAGTLVLAALLVWGSAHFD 512

Query: 468 AWEQGIMLERFLRLG---ALILAGVVTYFGCLYLCGFRPRHFARK 509
            W  G+  +R LR+G   ALI A VV YFG L   G R R F R+
Sbjct: 513 -W-IGLREQRLLRIGLLAALIAASVVLYFGVLAAVGVRLRSFLRR 555