Pairwise Alignments

Query, 512 a.a., lipid II flippase from Pseudomonas putida KT2440

Subject, 517 a.a., murein biosynthesis integral membrane protein MurJ from Variovorax sp. OAS795

 Score =  430 bits (1106), Expect = e-125
 Identities = 241/525 (45%), Positives = 324/525 (61%), Gaps = 24/525 (4%)

Query: 1   MNLLKSLAAVSSITMISRVLGFVRDTILARIFGAGVATDAFFIAFKLPNLLRRIFAEGAF 60
           M+LLKS + VS +T+ SR+ G VRD + A +FG    TDAF +AF++PNL RR+F EGAF
Sbjct: 1   MSLLKSASTVSLLTLASRITGLVRDVLFASVFGVSALTDAFNVAFRIPNLFRRVFGEGAF 60

Query: 61  SQAFVPILAEYKTQQGEEATRTFIAYVSGLLTLVLALVTAIGILAAPWVVWATAPGFVDS 120
           SQAFVP+LA  KT+ GEE  +  I +V+ LLT  L ++   G+L APW+VWA A G    
Sbjct: 61  SQAFVPVLAARKTEAGEEGAKALIDHVATLLTWALVVLCVAGVLGAPWLVWAMASGLAGF 120

Query: 121 TEKYALTTDLLRVTFPYIFLISLSSLAGAILNTWNRFSVPAFTPTLLNVAMIAFAVLLTP 180
                +T    R  FPYI  +SL +LAG +LNTW +F+VPA +P LLN+++I   V   P
Sbjct: 121 DAAVVMT----RWMFPYIGFMSLVALAGGVLNTWRKFAVPAASPVLLNLSLILAIVAGAP 176

Query: 181 YFN----PPIMALAWGVLAGGLAQLLYQLPALKKIGMLVLPRLNLK---------DAGVW 227
            F      PI A   GVL GG+ QL  Q+PAL+ +G++  PR+            D    
Sbjct: 177 LFRRYGIEPIYAQCAGVLVGGVLQLALQVPALRALGLM--PRIGASWKALRAAWADPTTR 234

Query: 228 RVLKQMLPAILGVSVSQISLIINTIFASFLVAGSVSWMYYADRLMELPSGVLGVALGTIL 287
           +VLK MLPA+LGVSV+QISL+INT  AS L  GSV+W+  ADRLME P+ +LGVALG +L
Sbjct: 235 KVLKLMLPALLGVSVAQISLLINTQIASHLAVGSVTWVSNADRLMEFPTAMLGVALGVVL 294

Query: 288 LPTLAKTYANKDREEYSRILDWGLRLCFLLVLPCTLALAILAEPLTVALFQYGKFSAFDA 347
           +P LA   A KD   YS +LDWGLRL  LL  PC +AL + A+PL   LF  G +   D 
Sbjct: 295 MPQLAGARAAKDDARYSSLLDWGLRLVILLSAPCAVALLLFAQPLVAVLFHNGAYQGEDV 354

Query: 348 AMTQRALIAYSVGLLAIILIKVLAPGFYAQQNIRTPVKIAVFTLVCTQLFNLALVGPLAH 407
             T  AL+ Y VGL+ ++ +KVLAPG+YA+Q+ RTP+ IA+  LV TQ+ N  LV  L H
Sbjct: 355 RRTTVALMGYGVGLVGLVAVKVLAPGYYARQDTRTPMLIAIGVLVLTQVLNFFLVPLLQH 414

Query: 408 AGLALAISLGACLNAGLLFWKLRSQQLFEPQPGWAVFLLKLVLAVTLMSAVLLAGMHYMP 467
           A L L I++GA +NA  L   L  +  + P+PGW  F+L+++    +++A+L  G  +  
Sbjct: 415 AALTLTIAIGALVNAVWLLVGLIRRGSYRPEPGWGKFVLQVLAGALVLAALLAWGSRHFD 474

Query: 468 AWEQGIMLERFLRLG---ALILAGVVTYFGCLYLCGFRPRHFARK 509
            W  G+  +RF R+G   ALI    + YF  L   G R R F R+
Sbjct: 475 -W-IGLREQRFHRIGLLAALIAGAALLYFAVLAAVGVRLRSFMRR 517