Pairwise Alignments

Query, 305 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

Subject, 306 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  541 bits (1393), Expect = e-159
 Identities = 270/303 (89%), Positives = 289/303 (95%)

Query: 3   RRPDPLAQVSDFDIRLLKIYRSVVECGGFSAAENVLGIGRSAISQQMNDLEQRLGLRLCQ 62
           RRPDPLAQVSDFDIRLL+I+RSVVECGGFSAAE VLGIGRSAISQQM+DLEQRLGLRLCQ
Sbjct: 4   RRPDPLAQVSDFDIRLLRIFRSVVECGGFSAAETVLGIGRSAISQQMSDLEQRLGLRLCQ 63

Query: 63  RGRAGFSLTEEGREVYHSALQLLSALETFRTEVNGLHQHLRGELNIGLTDNLVTLPHMRI 122
           RGRAGFSLTEEGREVY SALQLLSALE+FRTEVNGLHQHLRGEL IGLTDNLVTLPHMRI
Sbjct: 64  RGRAGFSLTEEGREVYQSALQLLSALESFRTEVNGLHQHLRGELIIGLTDNLVTLPHMRI 123

Query: 123 THALAELKDRGPDVRIQIRMIAPSQVEHGVLDGSLHVGVVPQTSPLSGLEYQPLYSERSL 182
           THALA+LK+RGPDV+IQIRMIAP++VE GVLDG LHVGVVPQ S LSGLEYQPLYSERSL
Sbjct: 124 THALAQLKERGPDVQIQIRMIAPNEVEQGVLDGRLHVGVVPQASALSGLEYQPLYSERSL 183

Query: 183 LYCAVGHPLFYADDQQIDDERLNSQEAITPTFRLPADIQAHYQALNCTASASDREGMAFL 242
           LYCAVGHPLFYAD++Q+DD R+++Q+AI PTFRLPA+IQAHYQALNCTASASDREGMAFL
Sbjct: 184 LYCAVGHPLFYADNKQLDDARVDAQDAIAPTFRLPAEIQAHYQALNCTASASDREGMAFL 243

Query: 243 ILTGRYIGYLPDHYAMFWVQQGRLRALKPKERFYDLSLSWVTRKGRRPNLVLESFLESLA 302
           ILTGRYIGYLPDHYA  WVQQGRLRALKP  RFYDLSL+ VTRKGRRP+LVLESFLESLA
Sbjct: 244 ILTGRYIGYLPDHYASLWVQQGRLRALKPATRFYDLSLASVTRKGRRPHLVLESFLESLA 303

Query: 303 ATR 305
           ATR
Sbjct: 304 ATR 306