Pairwise Alignments

Query, 247 a.a., Transcriptional regulator, TetR family from Pseudomonas putida KT2440

Subject, 235 a.a., Transcriptional regulator RutR of pyrimidine catabolism (TetR family) from Variovorax sp. SCN45

 Score =  158 bits (400), Expect = 8e-44
 Identities = 82/197 (41%), Positives = 116/197 (58%), Gaps = 2/197 (1%)

Query: 46  RIRQKNEQ--AIIQAAEDEFARHGFKGTSMNTIALKAGLPKANLHYYFTNKLGLYIAVLS 103
           R+RQ  ++  AI+ AA   F+R G  GTS++ +A +A + K+NL YYF NK  LY+ VL 
Sbjct: 35  RLRQIEDKRSAILGAALGLFSRFGLHGTSIDQVAARADVSKSNLLYYFANKEELYVNVLR 94

Query: 104 NIIELWDSTFNALSVDDDPGEALSQYIRTKMEFSRRNPQASRIFAMEVISGGTCLTEYFS 163
           +++ LW       S + DP EA+  YIR K+  SR  P ASR+F +E+I G   L +   
Sbjct: 95  DLLALWLEPLRGFSAEQDPAEAIGGYIRRKLVVSRDRPDASRLFCLEMIQGAPLLRDELD 154

Query: 164 ADYREWFRGRAAVFQAWIEAGKMDPVDPVHLIFLLWGSTQHYADFATQICQVTGRSRLTK 223
            + R     ++ V +AW+EAGK+ PVDP HLIF LW  TQHYADF  Q+  +TG +    
Sbjct: 155 RELRALVEKKSEVIRAWVEAGKLAPVDPHHLIFALWAVTQHYADFGVQVQALTGHTLEDA 214

Query: 224 QDMEDASNNLIHIILKG 240
              E    N+  I+L+G
Sbjct: 215 AFFEQTVENVQRIVLQG 231