Pairwise Alignments

Query, 247 a.a., Transcriptional regulator, TetR family from Pseudomonas putida KT2440

Subject, 230 a.a., Transcriptional regulator RutR of pyrimidine catabolism (TetR family) from Variovorax sp. SCN45

 Score =  134 bits (338), Expect = 1e-36
 Identities = 72/201 (35%), Positives = 111/201 (55%), Gaps = 1/201 (0%)

Query: 48  RQKNEQAIIQAAEDEFARHGFKGTSMNTIALKAGLPKANLHYYFTNKLGLYIAVLSNIIE 107
           RQ  E AI+  A++ FA  G+ G S++ IA +AG+ K +L YYF +K  LY  V +++++
Sbjct: 15  RQNIESAILAVAQERFALQGYGGVSIDDIAAEAGISKQSLLYYFPSKKALYRRVFNDVLD 74

Query: 108 LWDSTFNALSVDD-DPGEALSQYIRTKMEFSRRNPQASRIFAMEVISGGTCLTEYFSADY 166
            W S  ++L+  D +P  AL +Y+  K++FS  +P  SR+FA E+IS      +   A  
Sbjct: 75  SWLSNLDSLAAADLEPHAALERYVTQKLQFSYDHPSGSRLFAQEIISQAPQCGDDIEAKL 134

Query: 167 REWFRGRAAVFQAWIEAGKMDPVDPVHLIFLLWGSTQHYADFATQICQVTGRSRLTKQDM 226
              FR  AAV   W+  G   P+   HL+F LW  TQ YADFA Q+  + G+  L   D 
Sbjct: 135 VPAFRAEAAVLHRWMSTGHAAPLPVAHLLFTLWAMTQTYADFAWQMRMLLGKKALEPADF 194

Query: 227 EDASNNLIHIILKGCGITPAA 247
           + A   ++ ++    G+T  A
Sbjct: 195 DLARETIMRMLEGALGLTRPA 215