Pairwise Alignments

Query, 194 a.a., putative ribosome-binding factor from Pseudomonas putida KT2440

Subject, 204 a.a., FIG000605: protein co-occurring with transport systems (COG1739) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  129 bits (324), Expect = 3e-35
 Identities = 75/190 (39%), Positives = 107/190 (56%), Gaps = 12/190 (6%)

Query: 13  EEIRKSRFITLAGPISSAAEAMSFIE----RHSDLAATHNCWAWKLGA-----QYRSSDD 63
           EEI+KSRFITL         A +F+E     H D  A H+C AW  GA     Q   SDD
Sbjct: 15  EEIKKSRFITLLAHTDGVDAAKAFVESVRAEHPD--ARHHCVAWVAGAPDDSQQLGFSDD 72

Query: 64  GEPGGTAGRPILAAIEAQDCDQVVVLVIRWYGGIQLGTGGLARAYGGGANKCLQQAPKRL 123
           GEP GTAG+P+LA +      ++  +V+R+Y GI LGTGGL +AYGGG N+ L+Q   + 
Sbjct: 73  GEPAGTAGKPMLAQLMGSGVGEITAVVVRYYSGILLGTGGLVKAYGGGVNQALRQLATQR 132

Query: 124 LVQRSHFSCSCSFSELALVKLRLAEVDGLVLDEQFTANGVDLVIALGDAHLAPLQQQLAD 183
               + ++  C + +LA ++  L +  G ++   + A+ V L +AL  AH+     +LAD
Sbjct: 133 KTPLTEYTLQCEYGQLAGIEALLGQFAGKIVSSDYQAS-VRLRVALPFAHVNAFSTKLAD 191

Query: 184 LSRGRILLEA 193
            SRG + L A
Sbjct: 192 FSRGSLQLLA 201