Pairwise Alignments

Query, 194 a.a., putative ribosome-binding factor from Pseudomonas putida KT2440

Subject, 204 a.a., orf, hypothetical protein (VIMSS) from Escherichia coli BW25113

 Score =  130 bits (326), Expect = 2e-35
 Identities = 75/190 (39%), Positives = 108/190 (56%), Gaps = 12/190 (6%)

Query: 13  EEIRKSRFITLAGPISSAAEAMSFIE----RHSDLAATHNCWAWKLGA-----QYRSSDD 63
           EEI+KSRFIT+         A +F+E     H D  A H+C AW  GA     Q   SDD
Sbjct: 15  EEIKKSRFITMLAHTDGVEAAKAFVESVRAEHPD--ARHHCVAWVAGAPDDSQQLGFSDD 72

Query: 64  GEPGGTAGRPILAAIEAQDCDQVVVLVIRWYGGIQLGTGGLARAYGGGANKCLQQAPKRL 123
           GEP GTAG+P+LA +      ++  +V+R+YGGI LGTGGL +AYGGG N+ L+Q   + 
Sbjct: 73  GEPAGTAGKPMLAQLMGSGVGEITAVVVRYYGGILLGTGGLVKAYGGGVNQALRQLTTQR 132

Query: 124 LVQRSHFSCSCSFSELALVKLRLAEVDGLVLDEQFTANGVDLVIALGDAHLAPLQQQLAD 183
               + ++  C + +L  ++  L + DG +++  + A  V L +AL  A +A    +LAD
Sbjct: 133 KTPLTEYTLQCEYHQLTGIEALLGQCDGKIINSDYQA-FVLLRVALPAAKVAEFSAKLAD 191

Query: 184 LSRGRILLEA 193
            SRG + L A
Sbjct: 192 FSRGSLQLLA 201