Pairwise Alignments

Query, 647 a.a., Methyl-accepting chemotaxis transducer from Pseudomonas putida KT2440

Subject, 645 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  667 bits (1721), Expect = 0.0
 Identities = 351/647 (54%), Positives = 463/647 (71%), Gaps = 2/647 (0%)

Query: 1   MSIKQKLTWAFAVIAGLPIVLVATLVVINLRGEARDGFLDSSSREIRQVSNAMNIFFQGI 60
           M IK KL  AF  +A +P+ LVA + V+N R EA D F+D S+REIRQ+   +  FF G 
Sbjct: 1   MKIKNKLVLAFVSVAFIPVSLVAVISVMNARTEAVDQFIDGSTREIRQIDGNIRQFFDGT 60

Query: 61  NQNVEYMASQPMVAATGSELNKYMSATPSYELGEQASKILDFMTRLANSHPAYAYLSYGV 120
            QNV+ MA+  +  +  +  N   +   S  +  +A  +++   R   +HPA A LS G+
Sbjct: 61  LQNVDQMATDSVYTSVNTLKNYQPADAASQPMPAEAQTVIERFARYGATHPAAAILSIGL 120

Query: 121 NDGGYTGWPAGQKFVNYDPRTRPWYQLAMANPGKTMRTGAYYWAADDAVLVSTVRTVANQ 180
            DG Y  WP   +   YDPRTRPWY+ AMA+PGKT+RT AYY+  DD  LV T R +   
Sbjct: 121 EDGTYAKWPDDPQLAKYDPRTRPWYKAAMASPGKTVRTPAYYYDKDDVALVGTARALLEN 180

Query: 181 LGNPGGVVNIDVSLKGLTEIVKQIKLGESGYLMLVESNGNVMVDPRDATHNFKQLGSFGD 240
            G   GV  + VSLK LTE+VK IKLGESGY+MLVE +G V+VDPR+A HNFK L   G 
Sbjct: 181 -GKAKGVFVVSVSLKNLTELVKSIKLGESGYVMLVE-DGVVLVDPRNAAHNFKPLKGLGA 238

Query: 241 GYAKLAKAGKGLVEVELNGVHYMANVYPDQQLGWTFIGLIEQSEVMQTTTRLTWLIGVIA 300
            YA+LA+  +G  +V ++GVHYMANV+    LGW +IGLIE  EVM   TR+T+L  +I 
Sbjct: 239 AYAQLAETPQGSTDVVIDGVHYMANVWTSPGLGWRYIGLIEHREVMAEATRMTYLTALIV 298

Query: 301 VVLAALFAVVGAAFAKLIVRPINSVTNGLEDIAQGEGDLTRNLEIRGRDETAQLANWFNQ 360
            VL  +F ++ AAF+K+IV+PI  V+ GL+ IAQGEGDL   L+++G+DETA+LA WFN+
Sbjct: 299 GVLVLIFGLIAAAFSKVIVKPIGQVSTGLQSIAQGEGDLRHELQVQGKDETAELAGWFNK 358

Query: 361 FLGAIRSLIQHIGTAASKILSTSSSSTRVSSDMAEAAGRQREAVDMVSTAFHEMVATANE 420
           FL AIR LIQHIG A++ + + S  ++ V+ +M EAAGRQREAV++VSTAF+EMVATANE
Sbjct: 359 FLAAIRQLIQHIGAASANLQNASKVNSEVAHNMNEAAGRQREAVELVSTAFNEMVATANE 418

Query: 421 VARSCSQAAQSADSGQQQAREGQQQIDAAVHSVDRLSHEIEQSAQSIQQLERDSNAIQSI 480
           VARSCS AA+SA++G ++  EG+QQI+    +V+RL   + +S+Q++ +LE  S +I  I
Sbjct: 419 VARSCSGAAESAENGHRRVAEGKQQIEVTTDNVNRLGRRLTESSQAMVELEAGSRSINQI 478

Query: 481 LGTIRSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAKRTADSTAEIDGLLGNL 540
           LGTIR+IAEQTNLLALNAAIEAARAG+QGRGFAVVADEVRALAKRT+DST EI+ LLG L
Sbjct: 479 LGTIRAIAEQTNLLALNAAIEAARAGDQGRGFAVVADEVRALAKRTSDSTGEIEQLLGTL 538

Query: 541 ASRTAEVAEQMHASLEVSQQSVSRIGLARDSFGQIRESVDVIRDMNTQIATAAEEQHQVA 600
            ++T EV ++M + L++S+ SVS I  ARDSF  I+ SV+ IRD N QI+ AAEEQH VA
Sbjct: 539 ENKTQEVTQKMGSCLDLSRASVSSIESARDSFEGIQTSVNEIRDQNLQISAAAEEQHSVA 598

Query: 601 EDINRHISQIHGDAQLVAELAQAARQDSESLAGLSNELDTLVRRFRT 647
           E+INRHI QI+ +A+LV  LA +A+ DS  L+ LS+EL+ LV RF++
Sbjct: 599 EEINRHIQQIYDEARLVESLANSAQDDSGRLSNLSDELNGLVGRFKS 645