Pairwise Alignments

Query, 647 a.a., Methyl-accepting chemotaxis transducer from Pseudomonas putida KT2440

Subject, 544 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  248 bits (634), Expect = 4e-70
 Identities = 159/479 (33%), Positives = 257/479 (53%), Gaps = 21/479 (4%)

Query: 186 GVVNIDVSLKGLTEIVKQIKLGESGYLMLVESNGNVMVDPRDATHNFKQLGSFGD--GYA 243
           GV+  + + K     V+ ++     Y  + +    +++ P +   + + L +  D  G+A
Sbjct: 68  GVMTREAAQKQALSAVRGLRYDHDDYFWINDLTPVMIMHPANPKLDGQNLSAIRDPDGFA 127

Query: 244 K------LAKA-GKGLV---------EVELNGVHYMANVYPDQQLGWTFIGLIEQSEVMQ 287
                  LAKA G G+V         E  +    Y+    P    GW     +   +V  
Sbjct: 128 VFNEFVILAKAKGAGIVNYRWPKPGAEAPVAKTSYIQLFEP---WGWIIGSGVYVDDVQA 184

Query: 288 TTTRLTWLIGVIAVVLAALFAVVGAAFAKLIVRPINSVTNGLEDIAQGEGDLTRNLEIRG 347
             +   W    I + +A + A++ +  A+ IVRP+ +  N + +IA GE DLTR+L+  G
Sbjct: 185 EFSSQVWKASFIGLAIALVMALLVSLIARSIVRPLQAAVNAMGNIASGESDLTRSLDTHG 244

Query: 348 RDETAQLANWFNQFLGAIRSLIQHIGTAASKILSTSSSSTRVSSDMAEAAGRQREAVDMV 407
           +DE  QL+  FN F   +R ++  +   A+ +  +S      ++   + + +Q + +++V
Sbjct: 245 QDEVTQLSRHFNSFTAKLRQVVGQLQVCANALGQSSQELGSNATQAHDRSQQQSQQMELV 304

Query: 408 STAFHEMVATANEVARSCSQAAQSADSGQQQAREGQQQIDAAVHSVDRLSHEIEQSAQSI 467
           +TA +E+     +VA++   AA      Q QA++GQ  ID+++  +D+LS  I Q+ + I
Sbjct: 305 ATAINEVTYGVQDVAKNAEHAASEMRDAQAQAQQGQVNIDSSLQQIDQLSGTISQAVEVI 364

Query: 468 QQLERDSNAIQSILGTIRSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAKRTA 527
           + L  +S  I S+L  IRSIA+QTNLLALNAAIEAARAGEQGRGFAVVADEVR LA+RT 
Sbjct: 365 RTLSAESTQIGSVLEVIRSIADQTNLLALNAAIEAARAGEQGRGFAVVADEVRLLAQRTQ 424

Query: 528 DSTAEIDGLLGNLASRTAEVAEQMHASLEVSQQSVSRIGLARDSFGQIRESVDVIRDMNT 587
            STAEI G++  L   +    + +  S   SQ ++ + G A  S   I ES+  +  +N 
Sbjct: 425 KSTAEIQGMIERLQGHSEAAVKVISDSHSASQMTIEQAGQAGASLTAIGESLRNLNGLNA 484

Query: 588 QIATAAEEQHQVAEDINRHISQIHGDAQLVAELAQAARQDSESLAGLSNELDTLVRRFR 646
            IA+A  +Q  V EDIN+++++  G +   A  A+ +   S  L GLS +LD L+R+F+
Sbjct: 485 SIASATLQQAHVVEDINQNVTEAAGLSHSTALAAEQSSVASAHLRGLSEQLDGLLRQFK 543