Pairwise Alignments

Query, 259 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

Subject, 262 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  168 bits (425), Expect = 1e-46
 Identities = 88/253 (34%), Positives = 132/253 (52%), Gaps = 1/253 (0%)

Query: 6   HPRAIPALEHLPRPLYARAESLGAGSWTTRHQHDWVQFSYAISGVLGVYTRDGSYFAPPQ 65
           H   +P    LP P+Y R       +  T HQH W    Y+ SGV+ +      + +PPQ
Sbjct: 4   HNVRLPDFPRLPSPVYFRYSDFAPDTECTPHQHFWGSLDYSASGVMRMEVAGNRFMSPPQ 63

Query: 66  WGVWIPADAEHEVVTSMQAEMRSLYVRRDACPWAPEQCRVLEVTPLARELIKQFCLFPAD 125
           + VW+P   EH    +      S+ +  + C   P+Q   L ++ + + ++  F     +
Sbjct: 64  YAVWVPPHTEHSSYNAEAIVYHSVGLAPELCERLPQQPCTLAISDILKAILSDFAQRDVN 123

Query: 126 YPEDDSAEARLVAVLLDQLRSLPEVGFSLPLPRHPGLLALCNGLIAAPDQPQTLQQWARE 185
            P+ D A+ RL  VL+DQL+  P     LP  RHPGLL +  GL A P   + L  WA +
Sbjct: 124 MPQTD-ADIRLAQVLVDQLKQAPIHDCFLPYARHPGLLGVLEGLQADPADNRPLAHWAEQ 182

Query: 186 LGCSEKTLMRLFQRETGLSFRNWRQRMRLLSSLALLEAGENVTEAALGCGYDSTSAYIAA 245
           +  SE+TL RLF RE G+SF  WRQR+R L+++  L++  +V   A   GY S SA+IA 
Sbjct: 183 VHVSERTLARLFVRELGMSFGEWRQRLRYLAAIEALDSQRSVQHVAFDLGYSSASAFIAM 242

Query: 246 FKQLFGATPGELK 258
           F++  G TP + +
Sbjct: 243 FQRQAGCTPEQYR 255