Pairwise Alignments

Query, 259 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

Subject, 262 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  264 bits (675), Expect = 1e-75
 Identities = 139/260 (53%), Positives = 169/260 (65%), Gaps = 5/260 (1%)

Query: 1   MPIIGHP----RAIPALEHLPRPLYARAESLGAGSWTTRHQHDWVQFSYAISGVLGVYTR 56
           MP  GH     R++P L  LPRP+Y R ESL   + T RH H WVQ SYAISGVL + T 
Sbjct: 1   MPPKGHDKTVRRSVPGLSSLPRPVYGRTESLPNRALTRRHSHPWVQLSYAISGVLEIQTS 60

Query: 57  DGSYFAPPQWGVWIPADAEHEVVTSMQAEMRSLYVRRDACPWAPEQCRVLEVTPLARELI 116
            G + APPQ  VWIPA   H V +S   EMRSLY+      WA E+C VLEV+ L RELI
Sbjct: 61  VGRFVAPPQRAVWIPAGVPHRVFSSPHTEMRSLYLDCSVTAWAVERCHVLEVSSLLRELI 120

Query: 117 KQFCLFPADYPEDDSAEARLVAVLLDQLRSLPEVGFSLPLPRHPGLLALCNGLIAAPDQP 176
           + F   P +Y ED   + RL  V+LDQL + P+V   LPLP  P L  +   L   P+Q 
Sbjct: 121 RSFSELPVEYAED-GPDGRLAQVVLDQLAAAPQVDLMLPLPLDPRLRHIYRSLNLRPEQQ 179

Query: 177 QTLQQWARELGCSEKTLMRLFQRETGLSFRNWRQRMRLLSSLALLEAGENVTEAALGCGY 236
            TL QW+++LG SEKTL RLF  +TGL+FR WRQR+RLL++L  LE GE VT+ AL CGY
Sbjct: 180 TTLSQWSQKLGVSEKTLSRLFLSDTGLTFRAWRQRLRLLTALPALEQGERVTDVALACGY 239

Query: 237 DSTSAYIAAFKQLFGATPGE 256
           +STSA+I AF+Q F ATPGE
Sbjct: 240 ESTSAFINAFRQQFEATPGE 259