Pairwise Alignments

Query, 259 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

Subject, 273 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  164 bits (416), Expect = 1e-45
 Identities = 90/251 (35%), Positives = 133/251 (52%), Gaps = 15/251 (5%)

Query: 18  RPLYARAESLGAGSWTT--------------RHQHDWVQFSYAISGVLGVYTRDGSYFAP 63
           +PL    + +  G+W                 H H+  Q  YAI GV+ VY+    +  P
Sbjct: 19  KPLNEFLQEINEGAWAVISSATDYPENWVIPEHSHEKHQLLYAIEGVMVVYSALNQWTVP 78

Query: 64  PQWGVWIPADAEHEVVTSMQAEMRSLYVRRDACPWAPEQCRVLEVTPLARELIKQFCLFP 123
           P  G+W+PA   H +      +MRS++VR D  P  P + + + ++PL  ELIK      
Sbjct: 79  PNRGIWMPAGQVHSLRCVGTLKMRSVFVRPDRFPNMPGEPKTVSISPLLSELIKASVSLK 138

Query: 124 ADYPEDDSAEARLVAVLLDQLRSLPEVGFSLPLPRHPGLLALCNGLIAAPDQPQTLQQWA 183
             Y ED S +AR++ ++LD+L  LP +  SLP P  P L  +C  L   P    T+  W+
Sbjct: 139 PPYAED-SRDARIMHLILDELAILPALPLSLPQPADPRLQRICLALQDEPGDASTVAHWS 197

Query: 184 RELGCSEKTLMRLFQRETGLSFRNWRQRMRLLSSLALLEAGENVTEAALGCGYDSTSAYI 243
             L   +KT+ RLF++ETG++F  WRQ+ RLL +L  +  GE V + AL  GY+S SA+ 
Sbjct: 198 ERLSLDQKTIQRLFRKETGMTFGQWRQQARLLLALERIAVGEKVIDIALELGYESPSAFT 257

Query: 244 AAFKQLFGATP 254
           + FK+ FG TP
Sbjct: 258 SMFKKQFGKTP 268