Pairwise Alignments

Query, 259 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

Subject, 254 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  118 bits (295), Expect = 1e-31
 Identities = 78/252 (30%), Positives = 119/252 (47%), Gaps = 13/252 (5%)

Query: 9   AIPALEHLPRPLYARAESLGAGSWTTRHQHDWVQFSYAISGVLGVYTRDGSYFAPPQWGV 68
           A P L     P+   A +   G +   H HDW Q  YA+SGV+ V T   +   PPQ  V
Sbjct: 5   APPDLSDHAVPVQPLARTYPRGLYVEPHSHDWGQLLYAMSGVMWVETPREALVVPPQRAV 64

Query: 69  WIPADAEHEVVTSMQAEMRSLYVRRDACPWAPEQCRVLEVTPLARELIKQFCLFPADYPE 128
           W+P    H +      +MR++Y+R         Q +V+EV  L RELI           E
Sbjct: 65  WLPPGVAHGIRVVSDLQMRNIYLRPALAATLDSQVQVIEVGGLLRELIVTL------VEE 118

Query: 129 DDSAEARL------VAVLLDQLRSLPEVGFSLPLPRHPGLLALCNGLIAAPDQPQTLQQW 182
            DS EA        +A+L  Q     ++  ++P+     L+  C  ++AAP      +  
Sbjct: 119 GDSGEAAYYDAVVSLALLELQRARRSQIRIAMPVGVDRRLITACQAIMAAPSLEVAFEHH 178

Query: 183 ARELGCSEKTLMRLFQRETGLSFRNWRQRMRLLSSLALLEAGENVTEAALGCGYDSTSAY 242
           A   G S +TL RLFQ   G+ F  WR++++L +++A L  G++V+  A   GY S S++
Sbjct: 179 AETAGASVRTLSRLFQNNLGMGFAEWRRQVQLATAVAELIQGQSVSAIARSLGY-SPSSF 237

Query: 243 IAAFKQLFGATP 254
              F++  G  P
Sbjct: 238 SDMFRRELGVAP 249