Pairwise Alignments

Query, 259 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

Subject, 265 a.a., Transcriptional regulator, AraC family from Variovorax sp. SCN45

 Score =  151 bits (381), Expect = 2e-41
 Identities = 83/250 (33%), Positives = 124/250 (49%), Gaps = 1/250 (0%)

Query: 9   AIPALEHLPRPLYARAESLGAGSWTTRHQHDWVQFSYAISGVLGVYTRDGSYFAPPQWGV 68
           AI  +E +  P Y R + +GA +    H H W   +YA  G + + T    + +PPQ+ V
Sbjct: 9   AIQDVEGMEGPFYFRYDDIGADTHAASHSHTWGHLNYAAHGTMQMDTEGLRFLSPPQYAV 68

Query: 69  WIPADAEHEVVTSMQAEMRSLYVRRDACPWAPEQCRVLEVTPLARELIKQFCLFPADYPE 128
           WIP    H          RS+Y+    C   P +   + ++P+ + ++  F       P 
Sbjct: 69  WIPPKVVHSCTLRHAIVYRSIYIAPGLCGRLPAEPCTVRISPIIKSVLADFAARDLHVPR 128

Query: 129 DDSAEARLVAVLLDQLRSLPEVGFSLPLPRHPGLLALCNGLIAAPDQPQTLQQWARELGC 188
            + A+ RL  V++DQL         LP    P L+ +   L AAP   + L QWA  +  
Sbjct: 129 TE-ADLRLAHVVVDQLALAEVQRCYLPAAASPALVGVLEALQAAPGDHRPLAQWADSVHM 187

Query: 189 SEKTLMRLFQRETGLSFRNWRQRMRLLSSLALLEAGENVTEAALGCGYDSTSAYIAAFKQ 248
           +E+TL R  QRE G+SF  WRQR+R L ++  LEAG  V E A   GY + SA+IA F++
Sbjct: 188 TERTLARQCQRELGMSFGEWRQRLRFLRAIDALEAGRTVQEIAFDLGYSTASAFIAMFQR 247

Query: 249 LFGATPGELK 258
             G TP + +
Sbjct: 248 EAGTTPEQYR 257