Pairwise Alignments

Query, 259 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

Subject, 255 a.a., Transcriptional regulator, AraC family from Variovorax sp. SCN45

 Score =  153 bits (387), Expect = 3e-42
 Identities = 92/252 (36%), Positives = 128/252 (50%), Gaps = 5/252 (1%)

Query: 10  IPALEHLPRPLYARAESLGAGSWTTRHQHDWVQFSYAISGVLGVYTRDGSYFAPPQWGVW 69
           + +++ + R + A       G+    H H   QF Y  +GV+ V T DG++  PPQ GVW
Sbjct: 6   LDSVDAIARAVLAIGSDYPPGTMLHTHSHRRAQFLYGATGVMEVGTDDGAWVVPPQRGVW 65

Query: 70  IPADAEHEVVTSMQAEMRSLYVRRDACPWAPEQCRVLEVTPLARELIKQFCLFPADYPED 129
           IPA   H V   +    RSLY+     P   +QC VL V+PL R+L+ +    PA+Y   
Sbjct: 66  IPAGKPHRV-RMLGVSTRSLYIEPRDVPRKGDQCEVLNVSPLLRQLLMEAIEAPAEYDRQ 124

Query: 130 --DSAEARLVAVLLDQLRSLPEVGFSLPLPRHPGLLALCNGLIAAPDQPQTLQQWARELG 187
             D    RLV   + +  +LP +   +PLPR P L  LC   +  PD       WA +L 
Sbjct: 125 GRDGVLMRLVLHEVARADALPLL--HVPLPRDPALAGLCVEFLRRPDIHAAPSTWAGQLN 182

Query: 188 CSEKTLMRLFQRETGLSFRNWRQRMRLLSSLALLEAGENVTEAALGCGYDSTSAYIAAFK 247
            SE+T  R F  ETG++F  WRQR  +L +L+ L AGE VT  AL  GYDS  A+   F+
Sbjct: 183 VSERTFNRRFSLETGMAFGKWRQRACVLVALSRLAAGEPVTVVALDMGYDSPGAFSTMFR 242

Query: 248 QLFGATPGELKL 259
           +  G  P    +
Sbjct: 243 KTLGRPPSHFTM 254