Pairwise Alignments

Query, 259 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

Subject, 277 a.a., Transcriptional regulator, AraC family from Variovorax sp. SCN45

 Score =  125 bits (315), Expect = 7e-34
 Identities = 74/220 (33%), Positives = 114/220 (51%), Gaps = 1/220 (0%)

Query: 36  HQHDWVQFSYAISGVLGVYTRDGSYFAPPQWGVWIPADAEHEVVTSMQAEMRSLYVRRDA 95
           H+H   Q     SG++ V T  GS+  PP    W+P    H+V  S      ++ +   A
Sbjct: 50  HRHLRGQVFCVESGLVHVRTAHGSWLLPPHRAGWLPPGELHKVGISGATSGWTVLIAPAA 109

Query: 96  CPWAPEQCRVLEVTPLARELIKQFCLFPADYPEDDSAEARLVAVLLDQLRSLPEVGFSLP 155
               PE+  V+ ++ L R L+++   +   +   D+ + R+ AVLLD++R  P     LP
Sbjct: 110 AAQLPERPCVIGISELMRALVRRAVTW-GGHDTLDAEQERMAAVLLDEMRRAPHEPLHLP 168

Query: 156 LPRHPGLLALCNGLIAAPDQPQTLQQWARELGCSEKTLMRLFQRETGLSFRNWRQRMRLL 215
           +P    LL +   +   P+  +TL +WA   G S +TL RLF  ET +SF  WRQ+ RL+
Sbjct: 169 MPTDRRLLRIATAIYEQPENNRTLDEWAHWAGLSPRTLSRLFLAETAVSFAKWRQQARLV 228

Query: 216 SSLALLEAGENVTEAALGCGYDSTSAYIAAFKQLFGATPG 255
            +L  L  GE V + A   GY + S +IA F++ FG +PG
Sbjct: 229 HALERLARGEAVADIADALGYATPSNFIAMFRRAFGESPG 268