Pairwise Alignments

Query, 259 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

Subject, 273 a.a., Transcriptional regulator, AraC family from Variovorax sp. SCN45

 Score =  144 bits (362), Expect = 3e-39
 Identities = 82/219 (37%), Positives = 114/219 (52%), Gaps = 2/219 (0%)

Query: 36  HQHDWVQFSYAISGVLGVYTRDGSYFAPPQWGVWIPADAEHEVVTSMQAEMRSLYVRRDA 95
           HQH   Q   A+ G +        +  PPQ GVWIP    H    +  A +  L+V   A
Sbjct: 36  HQHPMGQLVIALRGAVSCEVPGTLWMVPPQAGVWIPGGTPHSNHGTANALIFYLFVAPGA 95

Query: 96  CPWAPEQCRVLEVTPLARELIKQFCLFPADYPEDDSAEARLVAVLLDQLRSLPEVGFSLP 155
               P +C  L ++P+  E+I+        Y E  SA  RL  VLLDQL ++P   FSLP
Sbjct: 96  AT-LPTKCCTLAISPMLSEMIQHLAGLAPTY-EPGSATDRLAHVLLDQLAAMPNEDFSLP 153

Query: 156 LPRHPGLLALCNGLIAAPDQPQTLQQWARELGCSEKTLMRLFQRETGLSFRNWRQRMRLL 215
           +P+   L  + + +   P   +TLQ WA E G SE+TL RL   +TGLSF  WR+++ ++
Sbjct: 154 MPQDARLRKISHAITLDPSDRRTLQDWAAETGASERTLNRLCTAQTGLSFGRWRRQLHMI 213

Query: 216 SSLALLEAGENVTEAALGCGYDSTSAYIAAFKQLFGATP 254
            +L  L  G  V + A G GY+S SA+I  FK+ FG  P
Sbjct: 214 VALRELSGGATVQQVAYGLGYESPSAFITMFKKAFGKPP 252