Pairwise Alignments

Query, 259 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

Subject, 257 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

 Score =  159 bits (402), Expect = 5e-44
 Identities = 83/221 (37%), Positives = 123/221 (55%), Gaps = 1/221 (0%)

Query: 36  HQHDWVQFSYAISGVLGVYTRDGSYFAPPQWGVWIPADAEHEVVTSMQAEMRSLYVRRDA 95
           H H   Q  YAI G++ V + +  +  PP  GVW+P    H +      +MRS++VR DA
Sbjct: 35  HSHTKHQLIYAIKGLMIVESGNECWTVPPSRGVWMPCGQVHAIRCVGDVKMRSVFVRSDA 94

Query: 96  CPWAPEQCRVLEVTPLARELIKQFCLFPADYPEDDSAEARLVAVLLDQLRSLPEVGFSLP 155
               P Q + + ++PL  ELIK    F A + ED S EAR++ ++LD++  LP +   L 
Sbjct: 95  ATGLPLQSKAISISPLLSELIKASVGFTAPFAED-SREARVMRLILDEICVLPTLPLKLS 153

Query: 156 LPRHPGLLALCNGLIAAPDQPQTLQQWARELGCSEKTLMRLFQRETGLSFRNWRQRMRLL 215
            P    L  +C  L   P+   T+  W   LG  EKT+ RLF++ETG++F  WRQ+ RL+
Sbjct: 154 QPSDQRLRVICTALHERPEDNATVADWGLRLGVDEKTIQRLFRKETGMTFGQWRQQARLM 213

Query: 216 SSLALLEAGENVTEAALGCGYDSTSAYIAAFKQLFGATPGE 256
            +L  +  GE + + A   GYDS SA+ + FK+ FG TP +
Sbjct: 214 QALERIALGERIIDVAGALGYDSPSAFASMFKRQFGTTPSQ 254