Pairwise Alignments

Query, 259 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

Subject, 255 a.a., helix-turn-helix transcriptional regulator from Dickeya dadantii 3937

 Score =  110 bits (276), Expect = 2e-29
 Identities = 78/240 (32%), Positives = 116/240 (48%), Gaps = 9/240 (3%)

Query: 22  ARAESLGAGSWTTRHQHDWVQFSYAISGVLGVYTRDGSYFAPPQWGVWIPADAEHEVVTS 81
           A A S   G     H H   Q  YA SGVL V      +  PPQ  +W+P   EH     
Sbjct: 19  ATAISYRRGEEDPPHYHLEGQLLYASSGVLLVEAAGRRWVIPPQRALWLPPLIEHSYRLL 78

Query: 82  MQAEMRSLYVR----RDACPWAP-EQCRVLEVTPLARELIKQFCLFPADYPEDDSAEARL 136
            + E+R++Y       +   +A  ++  V++V PL +ELI    LF  DY      + ++
Sbjct: 79  SRTELRAVYFSGSLISECAHFAKNDRVHVIDVVPLVKELIAG--LFINDY--HTLTKRKM 134

Query: 137 VAVLLDQLRSLPEVGFSLPLPRHPGLLALCNGLIAAPDQPQTLQQWARELGCSEKTLMRL 196
             +LL+ +   P +   LP+P+   L      L+ +     +L   A     SE++  RL
Sbjct: 135 ALLLLEIIGEAPSLPAELPMPQDDRLFRAVGELMFSHRWETSLTDMADIANMSERSFSRL 194

Query: 197 FQRETGLSFRNWRQRMRLLSSLALLEAGENVTEAALGCGYDSTSAYIAAFKQLFGATPGE 256
           F R+TG SFR W+QR R+ +SL LL     V + A   G+ S +A+ AAF+ + G TPGE
Sbjct: 195 FSRDTGFSFRTWKQRARIYASLDLLSENVPVKQIAWQLGFSSPAAFSAAFRAVMGLTPGE 254