Pairwise Alignments

Query, 425 a.a., Thiolase family protein from Pseudomonas putida KT2440

Subject, 398 a.a., 3-ketoacyl-CoA thiolase [fadN-fadA-fadE operon] (EC 2.3.1.16) from Variovorax sp. SCN45

 Score =  157 bits (398), Expect = 4e-43
 Identities = 130/447 (29%), Positives = 192/447 (42%), Gaps = 72/447 (16%)

Query: 1   MRSTRRVAILGGNRIPFARSNGAYAT--ASNQAMLTAALEGLIERYRLHGLRLGEVVAGA 58
           M+  +   I+   R P  +S+  Y      +  + T     L     L    + +++ G 
Sbjct: 1   MKQVQDAYIVSATRTPIGKSHRGYFRNYRPDDLLATTLRAALAAVPSLDPKAIEDIICGC 60

Query: 59  VLKHSRD-MNLTRECVLGSRLSPQTPAYDIQQACGTGLEAALLVANKIALGQIDCGIAGG 117
            +  S+  +N+ R   + + L        + + C +GL A  + A++I +G+ D  IA G
Sbjct: 61  AIPESQQGLNVARIGAVLAGLPTSVGGITVNRFCASGLSAVQMAADRIRVGEADVMIAAG 120

Query: 118 VDSTSDAPIAVNEGLRHILLQANRGKSLGERLKPFLKLRPHHLKPELPRNSEPRTGLSMG 177
           V+S S  P+  N                   L P +            R  +      MG
Sbjct: 121 VESMSMVPMMGNS----------------PSLSPSI----------FEREGDVGIAYGMG 154

Query: 178 EHCERMAHTWRVGRAEQDELALLSHQKLAAAYAEGWQDDLLTPFLSLARDNNL------- 230
              E++A  W+V R  QDE AL SHQK  AA   G   D +TP     R  NL       
Sbjct: 155 LTAEKVAQQWKVSREAQDEFALASHQKALAAQKAGKFADEITPIEVTDRTPNLETGESIA 214

Query: 231 -----------RPDLSLEQLARLKPAFDRSGQGTLTAGNSTPLTDGASLVLLGSEAWAQQ 279
                      RPD SLE LA+L+  F  + +GT+TAGNS+  +DGA  ++L SE   +Q
Sbjct: 215 KTRTVNLDEGARPDTSLEGLAKLRTVF--AARGTVTAGNSSQTSDGAGALILASEKAVKQ 272

Query: 280 QGLQVLAYLVDGETAAV-DFVTGREGLLMAPVYAVPRLLARNGLTLQDFDYYEIHEAFAA 338
            GL  LA  V   +  V   + G     + P+ A+P  L   GL  +D D++E++EAFAA
Sbjct: 273 YGLTPLARFVSFASKGVPPHIMG-----IGPIEAIPAALRYAGLKHEDIDWFELNEAFAA 327

Query: 339 QVLCTLKAWEDADYCRERLGLEAPLGAIDRSKLNVRGSSLAAGHPFAATGGRILANLAKL 398
           Q L  +            LGL       D SK+N  G ++A GHP  ATG    A +   
Sbjct: 328 QSLAVINT----------LGL-------DPSKVNPMGGAIALGHPLGATGAIRSATVVHA 370

Query: 399 LATAGKGRGLISICAAGGQGVTVIVER 425
           L       G++++C   GQG   I ER
Sbjct: 371 LRRENLKYGMVTMCVGMGQGAAGIFER 397