Pairwise Alignments

Query, 784 a.a., peptidoglycan glycosyltransferase from Pseudomonas putida KT2440

Subject, 852 a.a., peptidoglycan glycosyltransferase/peptidoglycan DD-transpeptidase MrcA from Dickeya dianthicola ME23

 Score =  112 bits (281), Expect = 6e-29
 Identities = 69/204 (33%), Positives = 112/204 (54%), Gaps = 6/204 (2%)

Query: 49  VLAEDGTPLWRFADADGVWRYPVSPEEVSPLYLQALLTYEDRWFYNHPGVNPLALARAAW 108
           V + DG  + +F +     R P+  +++ P  + A +  ED  F+ H GV+P  + RAA 
Sbjct: 50  VYSADGELIAQFGEKR---RIPLKLDQIPPTLVNAFIATEDSRFFEHHGVDPQGIIRAAM 106

Query: 109 LNLRGGRVVSGGSTLSMQVAR--LLDPHDRTLVGKLRQLWRTLQLEWHLSKRDILQIYLN 166
           + L  G    G ST++ Q+AR   L P +RTL+ K+++++  +++E  L+K +IL++YLN
Sbjct: 107 IALTSGHASQGASTITQQLARNFFLSP-ERTLLRKIKEVFLAIRIEQTLTKEEILELYLN 165

Query: 167 RAPFGGTLQGVAAASWAYLGKSPLHLTPAEAALLAVLPQAPSRLRPDRHPERAQRARDKV 226
           +   G    GV AA+  Y G+    LT A+ A++A LP+APS   P    +RA   R+ V
Sbjct: 166 KIYLGYRAYGVGAAAQVYFGRPVEQLTLAQMAMIAGLPKAPSTFNPLYSYDRAVARRNVV 225

Query: 227 LQRLAEYQVWPAQQIREAAEEPLV 250
           L R+ +       Q  +A  E LV
Sbjct: 226 LSRMLDENYITQAQYDQARNEKLV 249



 Score = 65.9 bits (159), Expect = 9e-15
 Identities = 74/267 (27%), Positives = 121/267 (45%), Gaps = 39/267 (14%)

Query: 222 ARDKVLQRLAEYQVW----PAQQIREAAEEPLVLAPRQEPALAPLL----ARRLNSAD-- 271
           A+DK+++ L +  V+    PA     +A++   +    E    PL     AR   S D  
Sbjct: 332 AQDKIVEALKKLPVYGPLFPAVVTDASADKAHAMMANGEKIDLPLAGVRWARAYRSDDQQ 391

Query: 272 --SPPLIRTTLDAALQ---RRLEDLLLGWRARLPERTSAAILVVEAQSMAVRAYLGSIDL 326
             +P  +   L+A  Q   R++++    W A++P+  ++A++ +  +  AV A +G  D 
Sbjct: 392 GPTPKRVTDVLEAGQQIWVRKVDNDW--WLAQVPD-VNSALVSLNPKDGAVLALVGGFDF 448

Query: 327 SDERRFGHVDMVRSLRSPGSTLKPFLYGMALDDGLIHSESLLQDVP-RRY-----GDYRP 380
           + + +F      ++LR  GS +KPFLY  A+D GL  + ++L D P  R+      D+ P
Sbjct: 449 N-QSKFNRA--TQALRQVGSNIKPFLYTAAMDKGLTLA-TILNDAPITRWDPGAGSDWSP 504

Query: 381 GNFSMGFSGPVSASSALALSLNLPAVQLLEAYGPKRFAAQLRMAGMPLILPPLAEPNL-- 438
            N    + G +     L  S N+  V+ + A G    A  L   G P       E N+  
Sbjct: 505 KNSPPEYDGQIRLRQGLGQSKNVVMVRAMRAMGVDYAADYLERFGFP-------EQNIVH 557

Query: 439 --SLILGGAGSRLEDLVGGYAALARGG 463
             SL LG A      +V GYA +  GG
Sbjct: 558 TESLALGSASFTPLQVVRGYAVMTNGG 584



 Score = 38.5 bits (88), Expect = 2e-06
 Identities = 17/40 (42%), Positives = 24/40 (60%)

Query: 507 ELVQRPLLAWKTGTSYGFRDAWSIGVGPRYLIGVWIGRPD 546
           +++QR  +  KTGT+   +DAW  G GP  +  VWIG  D
Sbjct: 705 KVLQRRDIGGKTGTTNNSKDAWFSGYGPNIVASVWIGFDD 744