Pairwise Alignments

Query, 445 a.a., MATE efflux family protein from Pseudomonas putida KT2440

Subject, 483 a.a., Na+-driven multidrug efflux pump from Sphingobium sp. HT1-2

 Score = 67.0 bits (162), Expect = 1e-15
 Identities = 116/469 (24%), Positives = 190/469 (40%), Gaps = 57/469 (12%)

Query: 3   QLAADWRHRPTHRKVWALAAPMILSNISVPLVALVDSTVIGHLPHAHQLGAVAVGATLFT 62
           Q A D    P    +   A P + SNI   L   +++  +G       L A A    +  
Sbjct: 6   QGARDLTQGPIASTLLTFAIPTLASNILQSLNGSINAIWVGRFLGPQALAATANANIIMF 65

Query: 63  FMVGLMGFLRMGSTGFAAQAAGRGDGAALRQVLVQGL----LLAVGFALLIGLLALPFSQ 118
            M  ++    M ST   AQA G  D  A R+     +    LLA+G A+  G    P + 
Sbjct: 66  LMFSVVFGFGMASTVMIAQAVGARDMDAARRAFGSAVGFCFLLAMGVAVA-GWFGGP-AL 123

Query: 119 LALHAMQPSAALQQSTEDFFHTRLLGLPAALASYALVGWFLGTQNARAPLAILLTTNLLN 178
           L L A  P A     T  +     + +PA+L S  ++    GT +AR PL  ++ +  ++
Sbjct: 124 LHLLATPPEAFDMALT--YLRVIFVAMPASLLSVMMMMGLRGTGDARTPLIFMILSVAID 181

Query: 179 IALNLWFVLGLD----WGVLGSARASVIAEWSAALLGLALTRPALRAYPGQIVWAALKRW 234
           + LN   +LGL      G+ GSA A+  A +  +L+ L +   A +  P ++  A L   
Sbjct: 182 LVLNPVLILGLGPIPAMGIGGSAAATAAAGF-VSLIALVIYTYA-KDLPLRLRGAEL--- 236

Query: 235 QAWRPLLAVNRDIFLRSLALQLVFLLITVQG----------ARLGEATVAANALLLNGLL 284
              RP +   R +  + L + L  ++++  G            L  A   A   +   L 
Sbjct: 237 GYLRPAMDEMRVLSTKGLPMGLQMIVMSTSGLVMIGLVNREGFLVTAAYGAAQQIWTYLQ 296

Query: 285 LTAYALDGLAHAVEALCGHAIGARDRDTLRRSLVVACGWSLITSLGFAGLFLLGGHLFID 344
           + A A+     AV A+    IGA   D + R          IT  G + L  + G + + 
Sbjct: 297 MPAMAMGA---AVSAMAAQNIGAGRWDRISR----------ITGYGISYLLAITGAMVVV 343

Query: 345 LQTDIESVRAAAYPY----LPYLALLPLIAVWSYLLDG---LFIGATRAREMRNA---ML 394
           +    E++ A    +    +     + L+A WS++L G   +  G  RA  +  A   +L
Sbjct: 344 ILIFHEALLALFLSHNQAVIDAAWNMQLLASWSFMLFGCTMILFGVMRANGVVVAPLLIL 403

Query: 395 VSVLIALPVA---VAMSGLGNHGLWMAF----LGFMGLRAVTLGWVGWR 436
           V  L A+ +    +A   +G   LW++F       + L A+     GWR
Sbjct: 404 VFTLFAVRLGFYYLAYPRIGADALWLSFPVGSAVSLTLAALVYWQGGWR 452