Pairwise Alignments

Query, 653 a.a., Methyl-accepting chemotaxis protein CtpL from Pseudomonas putida KT2440

Subject, 521 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  178 bits (451), Expect = 6e-49
 Identities = 114/272 (41%), Positives = 158/272 (58%), Gaps = 4/272 (1%)

Query: 366 RLRQYLVELVGTIRHNAEQVAGSSHALAGMSAALHGGAERQAGDTGQIRDALGELEATIQ 425
           RL+  L  L  T  H  +Q A  S+ LA  S++   G ERQ  +T Q+  A+ ++ AT Q
Sbjct: 238 RLKTCLTRLQDTAEHLNDQAA-QSNTLAHNSSS---GLERQRVETEQVATAVNQMAATTQ 293

Query: 426 QVAGDASAAAEASRDAGRAVEQGQAVIGQSLSGLRELVDEVQGNARMIEQLAEESATIGG 485
           +VA      A+A+++A R   +G+ + G++   ++ L   V      + QLA++S  IGG
Sbjct: 294 EVASHVQRTADATQEANRLTGRGRDIAGETREAIQRLSVAVGETGVTVTQLAKDSDEIGG 353

Query: 486 VLTVIRAIAEQTNLLALNAAIEAARAGEMGRGFAVVADEVRSLAQRTTGATGEIQALIDR 545
           V+ VI+ IA+QTNLLALNAAIEAARAGEMGRGFAVVADEVR LAQRT  +TG+I ALI +
Sbjct: 354 VVDVIKGIADQTNLLALNAAIEAARAGEMGRGFAVVADEVRQLAQRTAESTGQIHALIAK 413

Query: 546 LQQAARSSVAGMRAQLEHAEATANQAQAADGALDEIVCAIRTISDTAVRIADVTAQQSGA 605
           LQQ A ++V  M A    AE    +   AD AL  I  A+  I+D   +IA  T +QS  
Sbjct: 414 LQQTAAAAVQTMDAGHRQAEEGVARVMEADQALVGISEAVAHITDMTTQIAAATEEQSSV 473

Query: 606 VSEIRDHSERIHELGEDNLQRIGEGRKQGEQL 637
             EI  +   I  L +   ++     +  E+L
Sbjct: 474 AEEISRNISTIALLADQTSEQAMNSAQLSEEL 505



 Score = 36.6 bits (83), Expect = 3e-06
 Identities = 46/219 (21%), Positives = 93/219 (42%), Gaps = 31/219 (14%)

Query: 318 IDTLQRRLARTLTGLAPALSRWAEGDFAQAIALGKTNRELHDIQESLNRLRQYLVELVGT 377
           + T   ++A T   +A  + R A+         G+      + +E++ RL   + E   T
Sbjct: 281 VATAVNQMAATTQEVASHVQRTADATQEANRLTGRGRDIAGETREAIQRLSVAVGETGVT 340

Query: 378 IRH---NAEQVAGSSHALAGMS-----AALHGGAER-QAGDTGQ---------------I 413
           +     +++++ G    + G++      AL+   E  +AG+ G+                
Sbjct: 341 VTQLAKDSDEIGGVVDVIKGIADQTNLLALNAAIEAARAGEMGRGFAVVADEVRQLAQRT 400

Query: 414 RDALGELEATIQQVAGDASAAAEASRDAGRAVEQGQAVI---GQSLSGLRELVDEVQGNA 470
            ++ G++ A I ++   A+AA +      R  E+G A +    Q+L G+ E V  +    
Sbjct: 401 AESTGQIHALIAKLQQTAAAAVQTMDAGHRQAEEGVARVMEADQALVGISEAVAHITDMT 460

Query: 471 RMIEQLAEESAT----IGGVLTVIRAIAEQTNLLALNAA 505
             I    EE ++    I   ++ I  +A+QT+  A+N+A
Sbjct: 461 TQIAAATEEQSSVAEEISRNISTIALLADQTSEQAMNSA 499