Pairwise Alignments

Query, 617 a.a., Acetoin catabolism regulatory protein from Pseudomonas putida KT2440

Subject, 591 a.a., putative sigma-54 dependent transcriptional regulator from Pseudomonas putida KT2440

 Score =  268 bits (686), Expect = 4e-76
 Identities = 203/582 (34%), Positives = 291/582 (50%), Gaps = 20/582 (3%)

Query: 31  LILDSWRRSMDVYRLDPGSQQGPRILSQSLLNECRERAELFLRIASDAVARLHERVRG-A 89
           LI  SW R    + L P        LS++ L+   ER +  LR+  + V   +  + G A
Sbjct: 20  LIQASWDRCR-AHGLQPQHAPDFDCLSRAELSALLERRQNLLRLTREEVLPHYAHLLGNA 78

Query: 90  DYCVLLTDAQGRTIDYRVESAIRNDCRKAGLYLGTCWSEGEEGTCGVAAVLTSKAPVTVH 149
            Y V+L DA G  +D           +  G   G  W E   GT  +   L     V V 
Sbjct: 79  SYLVMLADASGCLLDSWGSRRFIEPRQHHGFSAGAHWHERGVGTNALGTTLICAEAVHVG 138

Query: 150 KRDHFRAAFIGLTCTAAPVFDPLGELLGVVDVSALQSPDDRRSQHLIRQLVEQTAREIEN 209
           + +HF      ++  AAP+FD   +L+G +DV++    D          LV    + +EN
Sbjct: 139 QDEHFLRQNRYMSSAAAPLFDAARQLVGALDVAS----DGYLPASQTLGLVRMMGQSLEN 194

Query: 210 AFFM-HSAQGHWVMRAHGTPGYVESQPDYLLAWDADGRLQAINSLARQRLVERLGRLPEH 268
              +   A  H  +  +     ++S    LL +D  G++ A N  A   L   +  L ++
Sbjct: 195 RLILAEHADQHAQLIFNSASDNLDSPWAGLLVFDERGQVLAANHRADSLL--GVNPLQQN 252

Query: 269 IGELFDIDQLRRVSASSAQ----RLPGLGGLYGRVSAPQQRQRAQPLRQAQDTRIEQHLR 324
           I +LF +   + +S    Q    +  G    + +   P++  R +P   + + R+E+ L 
Sbjct: 253 IEQLFQLPLQQLLSHPRQQPFALQATGRNRFHCQWHPPRETTR-RPEAGSAEPRLEKALI 311

Query: 325 LATRVKDCNLAVLVLGETGAGKEVFARQLHQQSQRCDGPFVTLNCAAIPESLIESELFGY 384
            A  + + ++ VLV GETG GKEVF   LH+ S R   P V +NCAAIP  L+ESELFGY
Sbjct: 312 QAGLLLEKDIPVLVEGETGVGKEVFVDALHRASSRARQPLVAVNCAAIPAELVESELFGY 371

Query: 385 VAGAFTGASSKGMQGLLQQADGGTLFLDEIGDMPLNLQTRLLRVLAEGEVAPLGAARRER 444
             GAFTGA  KG  GL+++AD G LFLDEIGDMPL  Q RLLRVL    + PLG+     
Sbjct: 372 DKGAFTGAHHKGNPGLIRKADHGILFLDEIGDMPLPTQARLLRVLQSRSIQPLGSGEPVP 431

Query: 445 VDIQVICATHRDLAAMVEDGRFREDLYFRLANARFELPPLRERDDRLGLIHQLLAEEAAA 504
           VDI+V+ A++R+LA  V  GRFR+DLY+R+A     LPPLRER DR  LI Q+ A     
Sbjct: 432 VDIRVVSASNRNLADEVRAGRFRQDLYYRIAGLTLVLPPLRERADRRQLIEQVHARYREP 491

Query: 505 CGVEVVLADDALQALLVYRWPGNLRQLRQVLRYACAVSEGGQVRLQDLPQEVRGEAVGSA 564
            G    L    +     + WPGNLR+L  VL+ A A++  G V ++ LP     E    +
Sbjct: 492 -GQPARLPPAIIDLFDQHPWPGNLRELVSVLQVALALAANGPVGVEHLPAGFLAE----S 546

Query: 565 ESGVSCPARQLLLDALIRH-RWKPADAARALGISRATLYRRV 605
           ++ V     +  L +L+       +  AR LGISR TLY+R+
Sbjct: 547 KTPVPIATEETDLQSLVEQANGNLSAVARRLGISRTTLYKRL 588