Pairwise Alignments

Query, 449 a.a., UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase from Pseudomonas putida KT2440

Subject, 470 a.a., UDP-N-acetylmuramate--L-alanine ligase from Xanthobacter sp. DMC5

 Score =  189 bits (480), Expect = 2e-52
 Identities = 146/470 (31%), Positives = 223/470 (47%), Gaps = 58/470 (12%)

Query: 3   IHILGICGTFMGSLAVLAKELGHRVTGSD----ANVYPPMSTQLEAQGIELTQGYDPAQL 58
           IH +GI G  M  +A +   LG+ V GSD    ANV      +L   GI++  G+  A +
Sbjct: 10  IHFVGIGGIGMSGIAEVLHNLGYEVQGSDVADSANV-----KRLREHGIKVMIGHAAANV 64

Query: 59  DPAPDLVVIGNAMSRGNPAVEYVLNKGLPYVSGPQWLADHVLQGRWVLAVAGTHGKTTTS 118
           D A ++VV+ +A+ R NP +     K LP V   + LA+ +++ +  +++AGTHGKTTT+
Sbjct: 65  DDA-EVVVVSSAIKRDNPELMAARAKRLPVVRRAEMLAE-LMRLKSCVSIAGTHGKTTTT 122

Query: 119 SMLAWVLEHAGMSPGFLIGGVPQNFSASARLGDTPFFVVEADEYDSAFFDKRSKFVHYHP 178
           S++A +L+     P  + GG+   +  +ARLGD  + VVEADE D  F    ++      
Sbjct: 123 SLVATLLDAGNFDPTVINGGIINAYGTNARLGDGNWMVVEADESDGTFLKLPTE------ 176

Query: 179 RTAILNNLEFDHADIFPDLASIERQFHHLVRTIPSEGLVIHPTTEQALERVIGMGCWTPV 238
             AI+ N++ +H D F     ++  F   V  +P  G  +       ++ ++G      V
Sbjct: 177 -VAIVTNVDPEHLDHFKTFDKVQEAFKAFVENVPFYGFAVMCIDHPVVQALVGRIEDRRV 235

Query: 239 QTTGEGGQWQARLLSPD----GSRFEVLFEG-------EVQGVVDWALTGQHNVANALAT 287
            T GE  Q   RL+  D     ++F V+F         E++G+    + G+HN  NA A 
Sbjct: 236 ITYGENPQADVRLVDVDLKGGVTKFGVVFRNRAGETVHEIRGL-RLPMPGKHNALNATAA 294

Query: 288 LAAARHVGVVPAMGIDGLSAFKSVKRRMEKVAEVQGVTIYDDFAHHPTAIATTLDGLRKR 347
           +A A  + V     I+ +S F  VKRR  +  E  GVT+YDD+ HHP  IA  L   R  
Sbjct: 295 IAVAHELKVPDEKIIEAISQFGGVKRRFTRTGEWNGVTVYDDYGHHPVEIAAVLKAAR-A 353

Query: 348 VGEAPVIAVIEPRSNSMKLGAHRDGLPESVNDADQVIWYAPANLGWDLAATAAQCKVPSV 407
             +  VIAV++P   + +L +  D      NDAD V+  AP         TA +  +P V
Sbjct: 354 ASDGQVIAVVQPHRYT-RLASLFDEFCTCFNDADHVV-VAP-------VYTAGEAPIPGV 404

Query: 408 VADSL------------------EAIIERVKGQARPGTQVVIMSNGGFGG 439
             D L                  E +   V G A+PG  V+ +  G   G
Sbjct: 405 DRDHLVQGLIAHGHRSVTALEGPEQLAGIVAGLAKPGDYVICLGAGSISG 454