Pairwise Alignments

Query, 449 a.a., UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase from Pseudomonas putida KT2440

Subject, 481 a.a., UDP-N-acetylmuramate--alanine ligase from Pseudomonas simiae WCS417

 Score =  157 bits (396), Expect = 9e-43
 Identities = 132/461 (28%), Positives = 220/461 (47%), Gaps = 31/461 (6%)

Query: 3   IHILGICGTFMGSLAVLAKELGHRVTGSDANVYPPMSTQLEAQGIELTQGYDPAQLDPAP 62
           IH +GI G  M  +A +   LG++V+GSD     P++ +L+  G ++  G+       A 
Sbjct: 19  IHFVGIGGVGMCGIAEVLLNLGYQVSGSDLKE-SPVTERLKTFGAQIFIGHRAENAAEA- 76

Query: 63  DLVVIGNAMSRGNPAVEYVLNKGLPYVSGPQWLADHVLQGRWVLAVAGTHGKTTTSSMLA 122
           D++V+ +A++  NP V   L + +P V   + LA+ +++ R  +AVAGTHGKTTT+S++A
Sbjct: 77  DVLVVSSAVNTSNPEVATALERRIPVVPRAEMLAE-LMRYRHGIAVAGTHGKTTTTSLIA 135

Query: 123 WVLEHAGMSPGFLIGGVPQNFSASARLGDTPFFVVEADEYDSAFFDKRSKFVHYHPRTAI 182
            V    G+ P F+IGG       +A+LG + + + EADE D++       F+H  P  A+
Sbjct: 136 SVFAAGGLDPTFVIGGRLNAAGTNAQLGTSRYLIAEADESDAS-------FLHLQPLVAV 188

Query: 183 LNNLEFDHADIFP-DLASIERQFHHLVRTIPSEGLVIHPTTEQALERVIGMGCWTPVQTT 241
           + N++ DH   +  D   +++ F   +  +P  GL +    +  +  ++ +    P  T 
Sbjct: 189 VTNIDEDHMATYDGDFNKLKKTFVEFLHNLPFYGLAVVCLDDPVVREILPL-VKRPTVTY 247

Query: 242 G--EGGQWQARLLSPDGSR--FEVLFEGEVQGVVDWALTGQHNVANALATLAAARHVGVV 297
           G  E    +A  +  +G +  F VL        V   + G HNV N+LAT+  A   GV 
Sbjct: 248 GFSEDADVRAINVRQEGMQTFFTVLRPDREPLDVSVNMPGNHNVLNSLATICIATDEGVS 307

Query: 298 PAMGIDGLSAFKSVKRRMEKVAEVQ----GVTIYDDFAHHPTAIATTLDGLRKRVGEAPV 353
               ++GLS F  V RR +   ++      V + DD+ HHPT +A  +  +R    E  +
Sbjct: 308 DEAIVEGLSRFAGVGRRFQVYGQLPVDGGDVMLVDDYGHHPTEVAAVIKAVRGGWPERRL 367

Query: 354 IAVIEPRSNSMKLGAHRDGLPESVNDADQVIWYAPANLGWDLAATAAQCKVPSVVAD--S 411
           + V +P   S     + D     + DA+ ++       G +    A   K+ + +     
Sbjct: 368 VMVYQPHRYSRTRDLY-DDFVNVLADANVLLLMEVYPAGEEPIPGADSRKLCNSIRQRGQ 426

Query: 412 LEAI-IER-------VKGQARPGTQVVIMSNGGFGGLHGKL 444
           L+ I IER       VK   R G  ++    G  GGL  KL
Sbjct: 427 LDPIYIERGVDLAPIVKPLLRAGDILLCQGAGDIGGLAPKL 467