Pairwise Alignments

Query, 449 a.a., UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase from Pseudomonas putida KT2440

Subject, 489 a.a., UDP-N-acetylmuramate--L-alanine ligase (EC 6.3.2.8) from Variovorax sp. SCN45

 Score =  177 bits (448), Expect = 9e-49
 Identities = 142/470 (30%), Positives = 225/470 (47%), Gaps = 37/470 (7%)

Query: 2   HIHILGICGTFMGSLAVLAKELGHRVTGSDANVYPPMSTQLEAQGIELTQGYDPAQLDPA 61
           HIH +GI G+ M  +A +   LG++++GSD      +  +L   GI    G+  A ++ A
Sbjct: 7   HIHFVGIGGSGMSGIAEVLLNLGYKISGSDLADSATLR-RLAGLGIGTFVGHAAAHIEGA 65

Query: 62  PDLVVIGNAMSRGNPAVEYVLNKGLPYVSGPQWLADHVLQGRWVLAVAGTHGKTTTSSML 121
            D VV   A+   NP V     K +P V     LA+ +++ +  +A+AGTHGKTTT+S++
Sbjct: 66  -DAVVTSTAVQPDNPEVLAAREKRIPVVPRALMLAE-LMRLKQGIAIAGTHGKTTTTSLV 123

Query: 122 AWVLEHAGMSPGFLIGGVPQNFSASARLGDTPFFVVEADEYDSAFFDKRSKFVHYHPRTA 181
           A VL  AG+ P F+IGG   +  A+A+LG   + VVEADE D++       F++  P  A
Sbjct: 124 ASVLAAAGLDPTFVIGGRLNSAGANAQLGSGDYIVVEADESDAS-------FLNLLPVMA 176

Query: 182 ILNNLEFDHADIF-PDLASIERQFHHLVRTIPSEGLVIHPTTEQALERVIGMGCWTPVQT 240
           ++ N++ DH + +  D A +++ F   +  +P  G+ I  T + A+  ++      PV +
Sbjct: 177 VVTNIDADHMETYGHDFAKLKKAFVDFLHRMPFYGVAILCTDDPAVREIVS-SVTCPVTS 235

Query: 241 TGEGGQWQARLLSPDGSRFEVLFEGEVQGVVDWA-------LTGQHNVANALATLAAARH 293
            G G   Q R L       ++ F  + +  V          L G+HNV NAL+ +A A  
Sbjct: 236 YGFGEDAQVRALDVRAVGGQMHFTAQRRNGVTLPDLPIVLNLPGEHNVRNALSVIAVAVE 295

Query: 294 VGVVPAMGIDGLSAFKSVKRRMEKVAE--VQG-----VTIYDDFAHHPTAIATTLDGLRK 346
           +G+       GL+ FK V RR +   +  VQG      T+ DD+ HHP  +A T+   R 
Sbjct: 296 LGIPDEAVQRGLAGFKGVGRRFQSYGDVAVQGGDAGTFTVIDDYGHHPVEMAATIAAARG 355

Query: 347 RVGEAPVIAVIEPRSNSMKLGAHRDGLPESVNDADQVIW---YAPANL------GWDLA- 396
              +  ++   +P   +       D   + +  AD V+    YA          G  LA 
Sbjct: 356 AFPDRRLVLAFQPHRYTRTRDCFED-FVKVIGTADAVLLGEVYAAGEAPIVAADGRTLAR 414

Query: 397 ATAAQCKVPSVVADSLEAIIERVKGQARPGTQVVIMSNGGFGGLHGKLAE 446
           A     KV  V  D + A+ + +   ARPG  V+ M  G  G +  K+ E
Sbjct: 415 ALRVAGKVEPVFVDDIAAMPQAILDNARPGDVVLSMGAGSIGAVPAKVVE 464