Pairwise Alignments

Query, 449 a.a., UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase from Pseudomonas putida KT2440

Subject, 471 a.a., UDP-N-acetylmuramate-alanine ligase from Agrobacterium fabrum C58

 Score =  182 bits (461), Expect = 3e-50
 Identities = 142/471 (30%), Positives = 224/471 (47%), Gaps = 40/471 (8%)

Query: 3   IHILGICGTFMGSLAVLAKELGHRVTGSD----ANVYPPMSTQLEAQGIELTQGYDPAQL 58
           +H +GI G  M  +A +   LGHRV GSD    ANV      +L  +GIE+  G+    L
Sbjct: 10  VHFIGIGGIGMSGIAEVLHNLGHRVQGSDQADSANVQ-----RLRDKGIEVFVGHTADNL 64

Query: 59  DPAPDLVVIGNAMSRGNPAVEYVLNKGLPYVSGPQWLADHVLQGRWVLAVAGTHGKTTTS 118
             A ++VV+  A+ + NP +     K LP V   + LA+ +++ R  +A+ GTHGKTTT+
Sbjct: 65  GDA-EVVVVSTAIKKNNPELIAAREKHLPIVRRAEMLAE-LMRFRNAIAIGGTHGKTTTT 122

Query: 119 SMLAWVLEHAGMSPGFLIGGVPQNFSASARLGDTPFFVVEADEYDSAFFDKRSKFVHYHP 178
           SM+A +LE   + P  + GG+   +  +AR+G+  + VVEADE D  F    +       
Sbjct: 123 SMVATLLEAGNLDPTVINGGIINAYGTNARMGEGEWMVVEADESDGTFLKLPAD------ 176

Query: 179 RTAILNNLEFDHADIFPDLASIERQFHHLVRTIPSEGLVIHPTTEQALERVIGMGCWTPV 238
             A++ N++ +H D + +  ++   F   V  +P  G  +       ++ ++G      V
Sbjct: 177 -VAVITNIDPEHLDHYGNFDAVRAAFRQFVENVPFYGFGVMCLDHPEVQALVGRIEDRKV 235

Query: 239 QTTGEGGQWQARL--LSPDGSR--FEVLFE----GEVQGVVDWAL--TGQHNVANALATL 288
            T GE  Q   R   +  DG+R  F+V       G++    D  L   G+HNV+NA A +
Sbjct: 236 ITYGENPQADVRFSNVRIDGTRSIFDVEIRRRRTGKIFSFKDLVLPMPGRHNVSNATAAI 295

Query: 289 AAARHVGVVPAMGIDGLSAFKSVKRRMEKVAEVQGVTIYDDFAHHPTAIATTLDGLRKRV 348
           A A  +G+  A    GL++F  VKRR     E  GV ++DD+ HHP  I   L   R+  
Sbjct: 296 AVANRLGISEADIKKGLASFAGVKRRFTLTGEANGVQVFDDYGHHPVEIKAVLAAAREAC 355

Query: 349 GEAPVIAVIEPRSNSMKLGAHRDGLPESVNDADQVIWYAPANLGWD-LAATAAQCKVPSV 407
            +  +IAV +P   S +L +  D      NDAD ++       G D +   +++  V ++
Sbjct: 356 -KGRIIAVHQPHRYS-RLSSLFDDFAHCFNDADTILLAPVYAAGEDPIEGASSEALVSAI 413

Query: 408 VA---------DSLEAIIERVKGQARPGTQVVIMSNGGFGGLHGKLAEALK 449
            A         +  E +  +V   A PG  VV++  G        L   LK
Sbjct: 414 KAAGHRDARFLEKREDLASQVAAIANPGDFVVLLGAGNITQWAAALPSELK 464