Pairwise Alignments

Query, 671 a.a., sigma-54 dependent transcriptional regulator from Pseudomonas putida KT2440

Subject, 480 a.a., Nitrogen regulation protein NR(I), GlnG (=NtrC) from Sphingobium sp. HT1-2

 Score =  224 bits (570), Expect = 9e-63
 Identities = 142/336 (42%), Positives = 199/336 (59%), Gaps = 14/336 (4%)

Query: 336 PALQNDFRRSVRVFERDVPLLLRGETGCGKEAFAQAVHQASERRGKPFVAINCASIPESL 395
           PA+Q  +R   RV   D+ +L+ GE+G GKE  A+A+H   +RR +PFVAIN A+IP  L
Sbjct: 146 PAMQEVYRTIARVLSNDLSILVLGESGTGKELVAEAIHSLGQRRTRPFVAINMAAIPREL 205

Query: 396 IESELFGYRGGSFTGARKEGMRGKLLQADGGTLLLDEIGDMPLALQTRLLRVLEERQVVP 455
           IE+ELFGY  G+FTGA+     GK  QA GGTL LDEIGDMP+  QTRLLRVL+  +V  
Sbjct: 206 IEAELFGYEKGAFTGAQAR-TAGKFEQAQGGTLFLDEIGDMPMEAQTRLLRVLQSGEVTT 264

Query: 456 IGG-EPQAVDVRIVSATHRDLLERVEQGSFREDLYYRLNGLEVALPAVRERSDKAQLL-- 512
           +GG +P  VDVRI++AT++DL   +E+  FR+DLYYRLN + V+LP +RER +   LL  
Sbjct: 265 VGGSKPVRVDVRIIAATNKDLPRLIEENRFRQDLYYRLNVVPVSLPPLRERREDVILLAR 324

Query: 513 DFLLRQETQG-QWIDIEPRARQALLAFNWPGNVRQMRNVLRTLVALCEDARITFADLPAV 571
            FL R    G     +   A Q L+A++WPGNVR+++N+++ L  L  +  +  AD+   
Sbjct: 325 HFLDRAAQDGLPRKALAEDAAQLLMAYHWPGNVRELQNIMQRLAVLSRE-NVIAADM--- 380

Query: 572 IRTSPPLAGVGEPAKMSDQEMEGEGVALVRGQARSHRSGGAAEIEGESAGTEVLLDAERQ 631
           +R + PL    EPA        G+    VR   +     G  +   +     +L   E  
Sbjct: 381 LRHALPLD--AEPA--DHAAPAGQLAQAVREWTKRQLGVGLGQANPQ-LHDNLLAVIEPI 435

Query: 632 ALKEVLEAKHWHLTRVAEHLGISRNTLYRKLRKHGI 667
            L+E L +   +  R A  LGI+RNTL +KL  +G+
Sbjct: 436 LLQETLASVDGNQIRAAGLLGINRNTLRKKLTDYGL 471