Pairwise Alignments

Query, 671 a.a., sigma-54 dependent transcriptional regulator from Pseudomonas putida KT2440

Subject, 445 a.a., Putative sensory histidine kinase YfhA from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  211 bits (536), Expect = 8e-59
 Identities = 133/329 (40%), Positives = 181/329 (55%), Gaps = 45/329 (13%)

Query: 348 VFERDVPLLLRGETGCGKEAFAQAVHQASERRGKPFVAINCASIPESLIESELFGYRGGS 407
           V + DV +L+ G++G GKE FAQA+H AS R  KPFVAINC ++PE L+ESELFG+  G+
Sbjct: 154 VAQSDVSVLINGQSGTGKEIFAQAIHNASPRSNKPFVAINCGALPEQLLESELFGHARGA 213

Query: 408 FTGARKEGMRGKLLQADGGTLLLDEIGDMPLALQTRLLRVLEERQVVPIGGEPQA-VDVR 466
           FTGA      G    A+GGTL LDEIGDMP  LQ +LLRVL+ER+V P+G      +DVR
Sbjct: 214 FTGA-VSNREGLFQAAEGGTLFLDEIGDMPAPLQVKLLRVLQERKVRPLGSNRDIDIDVR 272

Query: 467 IVSATHRDLLERVEQGSFREDLYYRLNGLEVALPAVRERSDKAQLL-DFLLRQETQGQWI 525
           I+SATHRDL + + +G FREDLYYRLN + + +PA+ ER++   LL + LLRQ  Q    
Sbjct: 273 IISATHRDLPKAMARGEFREDLYYRLNVVSLKIPALAERTEDIPLLANHLLRQSAQRHKP 332

Query: 526 DI---EPRARQALLAFNWPGNVRQMRNVLRTLVALCEDARITFADLPAVIRTSPPLAGVG 582
            +      A + L+  +WPGNVRQ+ NV+   VAL                TS P+    
Sbjct: 333 FVRAFSTDAMKRLMTASWPGNVRQLVNVIEQCVAL----------------TSSPVIS-- 374

Query: 583 EPAKMSDQEMEGEGVALVRGQARSHRSGGAAEIEGESAGTEVLLDAERQALKEVLEAKHW 642
               + +Q +EGE  AL                       E     E   L+++L+    
Sbjct: 375 --DALVEQALEGENTAL-------------------PTFAEARNQFELNYLRKLLQITKG 413

Query: 643 HLTRVAEHLGISRNTLYRKLRKHGITRGD 671
           ++T  A   G +R   Y+ L +H +   D
Sbjct: 414 NVTHAARMAGRNRTEFYKLLSRHELDAND 442