Pairwise Alignments

Query, 671 a.a., sigma-54 dependent transcriptional regulator from Pseudomonas putida KT2440

Subject, 470 a.a., nitrogen regulation protein NR(I) from Dickeya dianthicola ME23

 Score =  214 bits (544), Expect = 9e-60
 Identities = 136/337 (40%), Positives = 186/337 (55%), Gaps = 18/337 (5%)

Query: 336 PALQNDFRRSVRVFERDVPLLLRGETGCGKEAFAQAVHQASERRGKPFVAINCASIPESL 395
           PA+Q+ FR   R+    + +L+ GE+G GKE  A A+H+ S R   PF+A+N A+IP+ L
Sbjct: 146 PAMQDVFRIIGRLSRSSISVLINGESGTGKELVAHALHRHSPRTKAPFIALNMAAIPKDL 205

Query: 396 IESELFGYRGGSFTGARKEGMRGKLLQADGGTLLLDEIGDMPLALQTRLLRVLEERQVVP 455
           IESELFG+  G+FTGA  +  +G+  QADGGTL LDEIGDMPL +QTRLLRVL + Q   
Sbjct: 206 IESELFGHEKGAFTGA-NQIRQGRFEQADGGTLFLDEIGDMPLDVQTRLLRVLADGQFYR 264

Query: 456 IGGEPQA-VDVRIVSATHRDLLERVEQGSFREDLYYRLNGLEVALPAVRE-RSDKAQLLD 513
           +GG     VDVRI++ATH++L  RV++G FREDL++RLN + V LP +RE R D  +L  
Sbjct: 265 VGGYAAVKVDVRIIAATHQNLELRVQEGKFREDLFHRLNVIRVHLPPLRERREDIPRLAR 324

Query: 514 FLLRQETQGQWID---IEPRARQALLAFNWPGNVRQMRNVLRTLVALCEDARITFADLPA 570
           + L+   +   ++   + P    AL    WPGNVRQ+ N  R L  +     +   DLP 
Sbjct: 325 YFLQATARELGVEPKNLHPETEAALTRLPWPGNVRQLENTCRWLTVMAAGQEVLIQDLP- 383

Query: 571 VIRTSPPLAGVGEPAKMSDQEMEGEGVALVRGQARSHRSGGAAEIEGESAGTEVLLDAER 630
                P L     P        +     L +   R+ RSG       ++   E   + ER
Sbjct: 384 -----PELFETTAPDATVHVMPDSWATLLAQWADRALRSG------HQNLLAEAQPEMER 432

Query: 631 QALKEVLEAKHWHLTRVAEHLGISRNTLYRKLRKHGI 667
             L   L     H    A  LG  RNTL RKL++ G+
Sbjct: 433 TLLTTALRHTQGHKQEAARLLGWGRNTLTRKLKELGM 469