Pairwise Alignments

Query, 671 a.a., sigma-54 dependent transcriptional regulator from Pseudomonas putida KT2440

Subject, 483 a.a., two component response regulator from Agrobacterium fabrum C58

 Score =  214 bits (545), Expect = 7e-60
 Identities = 129/336 (38%), Positives = 197/336 (58%), Gaps = 8/336 (2%)

Query: 337 ALQNDFRRSVRVFERDVPLLLRGETGCGKEAFAQAVHQASERRGKPFVAINCASIPESLI 396
           A+Q  +R   R+ + D+ L++ GE+G GKE  A+A+H   +RR  PFVAIN A+IP  LI
Sbjct: 144 AMQEIYRVLARLMQTDLTLMITGESGTGKELVARALHDYGKRRNGPFVAINMAAIPRDLI 203

Query: 397 ESELFGYRGGSFTGARKEGMRGKLLQADGGTLLLDEIGDMPLALQTRLLRVLEERQVVPI 456
           ESELFG+  G+FTGA+     G+  QA+GGTL LDEIGDMP+  QTRLLRVL++ +   +
Sbjct: 204 ESELFGHEKGAFTGAQNRS-TGRFEQAEGGTLFLDEIGDMPMDAQTRLLRVLQQGEYTTV 262

Query: 457 GGE-PQAVDVRIVSATHRDLLERVEQGSFREDLYYRLNGLEVALPAVRERSDKAQLL--D 513
           GG  P   DVRIV+AT++DL + + QG FREDLYYRLN + + LP +R+R++    L   
Sbjct: 263 GGRTPIRTDVRIVAATNKDLKQSINQGLFREDLYYRLNVVPLRLPPLRDRAEDIPDLVRH 322

Query: 514 FLLRQETQG-QWIDIEPRARQALLAFNWPGNVRQMRNVLRTLVALCEDARITFADLPAVI 572
           F+   E +G +    E  A + + A+ WPGNVR++ N++R L+AL     IT   +   +
Sbjct: 323 FIQTGEKEGLEGKRFETEALEVMKAYAWPGNVRELENLIRRLMALYPQEVITREIIEQEL 382

Query: 573 RTSPPLAGVGEPAKMSDQEMEGEGVALVRGQARSHRSGGAAEIEGESAGTEVLLDAERQA 632
           ++  P + + + A  +      +    V    R + +     +        VL + E   
Sbjct: 383 QSDVPDSPLDKMAVRTGSLTISQA---VEENMRDYFASFGDGLPPPGLYDRVLRELEYPL 439

Query: 633 LKEVLEAKHWHLTRVAEHLGISRNTLYRKLRKHGIT 668
           +   L A   +  + A+ LG++RNTL +K+R+ G++
Sbjct: 440 ILAALTATRGNQIKAADLLGLNRNTLRKKIRELGVS 475