Pairwise Alignments

Query, 230 a.a., putative Transcriptional regulator PfeR from Pseudomonas putida KT2440

Subject, 227 a.a., chemotaxis protein CheY from Pseudomonas simiae WCS417

 Score =  133 bits (335), Expect = 2e-36
 Identities = 82/223 (36%), Positives = 123/223 (55%), Gaps = 1/223 (0%)

Query: 4   SLLLAEDDPRLLQDLDRHFRNRGFLVHACASGTQALNAIQQSQFELVLLDIMLPGIDGLS 63
           S+LL +DD  L + L ++    GF   A  +G          ++ +V+LD+MLP   G+ 
Sbjct: 3   SVLLVDDDQELTEMLRQYLECEGFEATAVHTGEAGEAEALSGRYSIVVLDVMLPQRSGIE 62

Query: 64  LLDALRRQQAVPVMLMSALGAEQDRISGFTRGADDYLPKPFSLAELDARVDALLRRV-AF 122
           +L  +R    VPV+L++A G   DRI+G   GADDY+PKP S  EL AR+ A++RRV A 
Sbjct: 63  VLRRIRAVSQVPVVLLTARGDNIDRITGLELGADDYVPKPSSPGELVARLRAIMRRVQAV 122

Query: 123 DRGTALRADVGEVMLDHDRQDVIHNGNAAGLTASEFRLLVTLLAHPDEALSKPFLYQTVL 182
            + T      G ++L   ++  + NG   G+T++EF LL  L     + +SK  L    L
Sbjct: 123 GQPTTEVIKTGSLVLWPGKRQAVWNGAELGVTSTEFSLLEELARCAGQVVSKKDLSLNAL 182

Query: 183 HRAYTRLDRGLDVHVCNLRRKLADINAQHLQIQAVRGQGYILV 225
               TR DR +DVH+ ++R+KL         IQ+VRG GY+L+
Sbjct: 183 GCPLTRYDRRIDVHISSIRQKLGPRPDAKAWIQSVRGLGYLLI 225